RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Slc30a3P97441 388 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 ItkQ03526 625 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tespa1Q3U132 458 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lsmem1Q3UQS2 128 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr8Q60892 310 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Has1Q61647 583 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mef2dQ63943 514 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Kir3dl2Q673W2 388 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Adamts16Q69Z28 1222 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 SvoplQ6PDF3 494 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pnma8aQ80VM8 430 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mterf2Q8BKY8 385 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gpr21Q8BX79 349 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc6a20aQ8VDB9 592 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdkal1Q91WE6 578 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 TmlheQ91ZE0 421 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lrrc17Q9CXD9 443 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Aldh1b1Q9CZS1 519 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ddi1Q9DAF3 408 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 AgkQ9ESW4 421 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Aldh1a3Q9JHW9 512 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Il22Q9JJY9 179 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Clcn5Q9WVD4 746 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm13276A0A087WR18 182 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm5485A0A1D5RM98 91 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Dcdc2bF7BCK0 340 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 NapsaO09043 419 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Hspa1bP17879 642 aaKnown RBP13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Nfatc3P97305 1075 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sdr16c6Q05A13 316 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cpne9Q1RLL3 553 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Khdrbs1Q60749 443 aaKnown RBP13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ppp1r26Q6A025 1163 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pan2Q8BGF7 1200 aaKnown RBP13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pex26Q8BGI5 305 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rftn2Q8CHX7 500 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Trib2Q8K4K3 343 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cant1Q8VCF1 403 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pcdha8Q91Y12 946 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Frmd4bQ920B0 1035 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mat2bQ99LB6 334 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 DtnaQ9D2N4 746 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr703Q9EPF5 319 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tmem8aQ9ESN3 769 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 CtsrQ9JIA9 334 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 ArntlQ9WTL8 632 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc6a21A0A1B0GSD2 748 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Azin1O35484 448 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cd4P06332 457 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gpatch4Q3TFK5 415 aaKnown RBP13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Sgo2Q7TSY8 1164 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 R3hcc1lQ8BJM3 775 aaKnown RBP13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Nipal1Q8BMW7 416 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cacnb2Q8CC27 655 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 ManbaQ8K2I4 879 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Akr1c13Q8VC28 323 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Glis2Q8VDL9 521 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 PtsQ9R1Z7 144 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Insl5Q9WUG6 135 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 H2afb2S4R1M3 115 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Sbf1Q6ZPE2 1867 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Acnat1A2AKK5 416 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm3526E9PZM0 191 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Krt83E9Q1Y9 479 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Obox5G3X9P6 291 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Vmn2r1O70410 912 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pnrc1Q3TWH3 297 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Kmt5cQ6Q783 468 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mgat5bQ765H6 792 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gjd4Q8BSD4 364 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rdh13Q8CEE7 334 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 4932414N04RikQ8CEQ9 752 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Slc45a3Q8K0H7 553 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mcoln3Q8R4F0 553 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Hip1Q8VD75 1029 aaKnown RBP13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 DarsQ922B2 501 aaKnown RBP13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fastkd2Q922E6 689 aaKnown RBP13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cdkn2aipnlQ9D211 116 aaKnown RBP13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Znf687Q9D2D7 1237 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Eef1akmt2Q9D853 244 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 PolkQ9QUG2 852 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Nrg4Q9WTX4 115 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ralgapa2A3KGS3 1872 aa13.39□□□□□ -0.27
Nup88-201ENSMUST00000035283 Smok4aA0JLX3 433 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 WapP01173 134 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Atxn1lP0C7T6 687 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 PthlhP22858 175 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 TubP50586 505 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pcsk1P63239 753 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cd300lgQ1ERP8 331 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tmem173Q3TBT3 378 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pnpla1Q3V1D5 599 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Slc6a3Q61327 619 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Dclk2Q6PGN3 756 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gpr141Q7TQP0 305 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr834Q7TRG8 312 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Parp12Q8BZ20 711 aaKnown RBP13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mab21L3Q8CI17 429 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 Traf3ip2Q8N7N6 555 aa13.38□□□□□ -0.27
Nup88-201ENSMUST00000035283 AcmsdQ8R519 336 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms