RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ddx28Q9CWT6 540 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Taf1dQ9D4V4 322 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PgcQ9D7R7 392 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lcn5A2AJB7 192 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r27D3YUK6 857 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r120E9PX34 856 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Adamts14E9PX39 1209 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cyp2w1E9Q816 493 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 SagP20443 403 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Irf3P70671 419 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nfe2l1Q61985 741 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tll1Q62381 1013 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tas2r131Q7M708 310 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nacc1Q7TSZ8 514 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Znf423Q80TS5 1292 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp438Q8BFX2 798 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rprd1aQ8VDS4 312 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fastkd2Q922E6 689 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PigxQ99LV7 254 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rsph14Q9D3W1 341 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Bpifa3Q9D9J8 232 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slco1a4Q9EP96 670 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Insl5Q9WUG6 135 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Epb41l1Q9Z2H5 879 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tnfrsf14A0A1W2P7D5 276 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Maml2F6U238 1170 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 NagluO88325 739 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Hcn1O88704 910 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gabrb3P63080 473 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Txnl4aP83877 142 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mgat3Q10470 538 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cyb5r2Q3KNK3 276 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Aarsd1Q3THG9 412 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc5a10Q5SWY8 596 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 NkaplQ5SZT7 395 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cpa6Q5U901 438 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Sez6lQ6P1D5 963 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Q8BH50 245 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmem209Q8BRG8 561 aaKnown RBP11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Snx17Q8BVL3 470 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gucy1b2Q8BXH3 824 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TiparpQ8C1B2 657 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 GrpQ8R1I2 146 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kbtbd12Q9D618 625 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr1023A2ASU6 311 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmem45a2B7ZWJ5 289 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rundc3aO08576 446 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cd4P06332 457 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rab8aP55258 207 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ptcd3Q14C51 685 aaKnown RBP11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 LcorlQ3U285 600 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kcna5Q61762 602 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcsk9Q80W65 694 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp719Q8BIV1 735 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mmgt2Q8R3L0 123 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mcoln3Q8R4F0 553 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pth2rQ91V95 546 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Abcb8Q9CXJ4 717 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ddi1Q9DAF3 408 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r38G3UYA8 861 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r33K7N705 861 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fpr-rs3O88537 343 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ap1g1P22892 822 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc11a2P49282 568 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 MitfQ08874 526 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Armc5Q5EBP3 926 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Abhd15Q5F2F2 459 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Serpina12Q7TMF5 413 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Psmd11Q8BG32 422 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gpr20Q8BYC4 358 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc35b2Q91ZN5 431 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm5160F8VPN3 147 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fignl2J3QK54 644 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TpmtO55060 240 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ufm1P61961 85 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr169Q7TS53 313 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Piwil2Q8CDG1 971 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dlk2Q8K1E3 382 aa11.29□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Chd5A2A8L1 1946 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Celf5D3Z4T1 395 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TpteG5E8H5 664 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nfkb1P25799 971 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Faf2Q3TDN2 445 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pik3r6Q3U6Q4 756 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Afg1lQ3V384 480 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 CochQ62507 552 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Entpd3Q8BFW6 529 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmem62Q8BXJ9 643 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 SynpoQ8CC35 929 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmem221Q8K071 230 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rsph1Q8VIG3 301 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 2610042L04RikQ9D073 150 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lamb1P02469 1786 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm3336J3QMQ6 198 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Asna1O54984 348 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Hmgb2P30681 210 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp78Q5U406 512 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Il15raQ60819 263 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mapre1Q61166 268 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Runx1t1Q61909 577 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms