RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Trpc1Q61056 793 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Bcl2l1Q64373 233 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tmem121Q80XA0 318 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Prpf18Q8BM39 342 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 LnpepQ8C129 1025 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mkl1Q8K4J6 964 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ddx28Q9CWT6 540 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rnf146Q9CZW6 359 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Actrt2Q9D9L5 377 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 MecrQ9DCS3 373 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Spag4Q9JJF2 443 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Arih2Q9Z1K6 492 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm14781A2A9Q9 366 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lzts3A2AHG0 700 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Grin3aA2AIR5 1135 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm8267E9Q207 261 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 CkmP07310 381 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Aldh1a1P24549 501 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mc1rQ01727 315 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mageb5Q14AN0 366 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ulk3Q3U3Q1 472 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tnks2Q3UES3 1166 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr464Q5SW48 313 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rnf145Q5SWK7 663 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 TCAIMQ66JZ4 499 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc13a5Q67BT3 572 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Olfr1198Q7TR12 308 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc36a3Q811P0 477 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Krr1Q8BGA5 380 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Npas4Q8BGD7 802 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pgm2l1Q8CAA7 621 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Hectd2Q8CDU6 774 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zswim3Q8CFL8 695 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Kcnc4Q8R1C0 628 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Isoc1Q91V64 297 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Vps11Q91W86 941 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Zdhhc7Q91WU6 308 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tpgs1Q99MS8 303 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mrpl1Q99N96 336 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 5530400C23RikQ9D3I0 173 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Apbb2Q9DBR4 760 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Habp4Q9JKS5 411 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pias4Q9JM05 507 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Hao2Q9NYQ2 353 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cdkl2Q9QUK0 568 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Man2b1O09159 1013 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Atp6v0d1P51863 351 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Slc5a10Q5SWY8 596 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpr62Q80UC6 358 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 BicralQ8CHH5 1074 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Aqp12Q8CHJ2 290 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ago1Q8CJG1 857 aaKnown RBP10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 MfrpQ8K480 584 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gprc5bQ923Z0 410 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Trim33Q99PP7 1142 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Wdr12Q9JJA4 423 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cyp2g1Q9WV19 494 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gria4Q9Z2W8 902 aa10.85□□□□□ -0.67
Msh3-201ENSMUST00000022220 Arfgef1G3X9K3 1846 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Nipsnap3aB1AWZ3 247 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Alas2P08680 587 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ephb3P54754 993 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Krt2Q3TTY5 707 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tex24Q5DP50 351 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Klra8Q60682 266 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pcbp2Q61990 362 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Thoc7Q7TMY4 204 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Dnajb13Q80Y75 316 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fzd10Q8BKG4 582 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Q8CC96 669 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mrgpra2Q91WW4 305 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lrrc18Q9CQ07 262 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 ProzQ9CQW3 399 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lsm12Q9D0R8 195 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cpxm2Q9D2L5 764 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Q9D3J9 298 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 CtsmQ9JL96 333 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Msl3Q9WVG9 525 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Top3bQ9Z321 862 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Itih4A6X935 942 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 UprtB1AVZ0 310 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mtx3D3YTP3 312 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 KlO35082 1014 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Sdc4O35988 198 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tpst1O70281 370 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ap2a1P17426 977 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Defa8P50706 81 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Dnal1Q05A62 190 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Abcd2Q61285 741 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ifi47Q61635 420 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 PhgdhQ61753 533 aaKnown RBP10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Rundc3bQ6PDC0 408 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Lrrc8dQ8BGR2 859 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Znf276Q8CE64 614 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gramd1aQ8VEF1 722 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Spg21Q9CQC8 308 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 S100a14Q9D2Q8 104 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ephx1Q9D379 455 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 1700080O16RikQ9D9G4 284 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Nmnat1Q9EPA7 285 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms