RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PGAM4Q8N0Y7 254 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 STYXQ8WUJ0 223 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 NTAN1Q96AB6 310 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 ABHD8Q96I13 439 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 CCDC28BQ9BUN5 200 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 STRA6Q9BX79 667 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 PAIP2BQ9ULR5 123 aaKnown RBP14.39□□□□□ -0.11
SCARB2-216ENST00000639300 UGT2B4P06133 528 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 DEFB115Q30KQ5 88 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 C6orf52Q5T4I8 152 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 TTC23Q5W5X9 447 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 SLC9A4Q6AI14 798 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 TXNDC11Q6PKC3 985 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 PAOXQ6QHF9 649 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 PRSS55Q6UWB4 352 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-216ENST00000639300 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 CCDC103Q8IW40 242 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 OR52B2Q96RD2 323 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 NKX1-2Q9UD57 310 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-216ENST00000639300 MAPK8P45983 427 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 PRKAG1P54619 331 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 NOGQ13253 232 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 PLCL1Q15111 1095 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 SIX1Q15475 284 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-216ENST00000639300 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 CPNE9Q8IYJ1 553 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 CPSF7Q8N684 471 aaKnown RBP14.39□□□□□ -0.11
SCARB2-216ENST00000639300 PANX1Q96RD7 426 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 CST1P01037 141 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 CLCQ05315 142 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 XKR6Q5GH73 641 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 OR13C4Q8NGS5 318 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 HIPK3Q9H422 1215 aa14.39□□□□□ -0.11
SCARB2-216ENST00000639300 ZFP37Q9Y6Q3 630 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-216ENST00000639300 HLA-DQB2P05538 268 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ANXA6P08133 673 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ITPKAP23677 461 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 IVDP26440 423 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 CDH5P33151 784 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-216ENST00000639300 HSPA7P48741 367 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 BNIP2Q12982 314 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ARMC6Q6NXE6 501 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ZCCHC8Q6NZY4 707 aaKnown RBP14.38□□□□□ -0.11
SCARB2-216ENST00000639300 CAND1Q86VP6 1230 aaKnown RBP14.38□□□□□ -0.11
SCARB2-216ENST00000639300 WDR60Q8WVS4 1066 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SMOQ99835 787 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 APOL4Q9BPW4 351 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 CFAP97Q9P2B7 532 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 CIDEBQ9UHD4 219 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 FKBPLQ9UIM3 349 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 TPRKBQ9Y3C4 175 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SIX3O95343 332 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SNAI1O95863 264 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ZNF132P52740 706 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 BLMHQ13867 455 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 FCRL5Q96RD9 977 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SLC2A6Q9UGQ3 507 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 TMEM233B4DJY2 109 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 PPP2R1BP30154 601 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ARL4DP49703 201 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SLC18A1P54219 525 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 ACAP2Q15057 778 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 IL23RQ5VWK5 629 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 PARP8Q8N3A8 854 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 UBR7Q8N806 425 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 CNTD1Q8N815 330 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SETD9Q8NE22 299 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 MYO19Q96H55 970 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 APOLD1Q96LR9 279 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 OSBPL11Q9BXB4 747 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 TNKS2Q9H2K2 1166 aa14.38□□□□□ -0.11
SCARB2-216ENST00000639300 SMIM31A0A1B0GVY4 71 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 RFXANKO14593 260 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 AHSGP02765 367 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 SLC18A2Q05940 514 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 B3GNT9Q6UX72 402 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 CDHR3Q6ZTQ4 885 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 ADCY4Q8NFM4 1077 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 OR2T12Q8NG77 320 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 RPL10LQ96L21 214 aaKnown RBP14.37□□□□□ -0.11
SCARB2-216ENST00000639300 NPY6RQ99463 290 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 IPPKQ9H8X2 491 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 SETD1AO15047 1707 aaKnown RBP14.37□□□□□ -0.11
SCARB2-216ENST00000639300 SLC7A4O43246 635 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 TYROBPO43914 113 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 OR4F21O95013 312 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
SCARB2-216ENST00000639300 RPS7P62081 194 aaKnown RBP14.37□□□□□ -0.11
SCARB2-216ENST00000639300 KIAA0930Q6ICG6 404 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-216ENST00000639300 TYW3Q6IPR3 259 aaKnown RBP14.37□□□□□ -0.11
SCARB2-216ENST00000639300 ABRAXAS1Q6UWZ7 409 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 SFRP1Q8N474 314 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 SUSD6Q92537 303 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 NACC2Q96BF6 587 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 ATG10Q9H0Y0 220 aa14.37□□□□□ -0.11
SCARB2-216ENST00000639300 PCDHAC1Q9H158 963 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms