RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TTC16Q8NEE8 873 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 BHMTQ93088 406 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 ATOH8Q96SQ7 321 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 TCF12Q99081 682 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 FEM1AQ9BSK4 669 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 TFB2MQ9H5Q4 396 aaKnown RBP21.45■■□□□ 1.02
CLN6-224ENST00000638076 SYTL2Q9HCH5 934 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 TBX21Q9UL17 535 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 FNDC3AQ9Y2H6 1198 aaKnown RBP21.45■■□□□ 1.02
CLN6-224ENST00000638076 SIX3O95343 332 aaPredicted RBP21.45■■□□□ 1.02
CLN6-224ENST00000638076 INHBCP55103 352 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 DEFB103AP81534 67 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 PFKFB4Q16877 469 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 PSAPL1Q6NUJ1 521 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 TCEAL8Q8IYN2 117 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 ADAMTS19Q8TE59 1207 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 LHX3Q9UBR4 397 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 ATP11BQ9Y2G3 1177 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 MKI67P46013 3256 aaKnown RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 A0A0U1RQS6 177 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 MC4RP32245 332 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 RAB44Q7Z6P3 723 aaPredicted RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 KBTBD2Q8IY47 623 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 PIANPQ8IYJ0 282 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 TMA16Q96EY4 203 aaKnown RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 CDRT15Q96T59 188 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 EFCAB1Q9HAE3 211 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 BATF3Q9NR55 127 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 FCF1Q9Y324 198 aaKnown RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 TYW5A2RUC4 315 aaKnown RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 UBDO15205 165 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 GREM1O60565 184 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 LATS1O95835 1130 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 SPATA31D3P0C874 917 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 ENO3P13929 434 aaPredicted RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 ART3Q13508 389 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 PTPRNQ16849 979 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 INO80DQ53TQ3 878 aaPredicted RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 BNC2Q6ZN30 1099 aaPredicted RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 GK5Q6ZS86 529 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 SPATA31D4Q6ZUB0 917 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 HJURPQ8NCD3 748 aaPredicted RBP21.44■■□□□ 1.02
CLN6-224ENST00000638076 WFDC5Q8TCV5 224 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 SERPINI1Q99574 410 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 GPR21Q99679 349 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 DERL2Q9GZP9 239 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 TMEM39AQ9NV64 488 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 SPG21Q9NZD8 308 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 STK39Q9UEW8 545 aa21.44■■□□□ 1.02
CLN6-224ENST00000638076 LRRC14BA6NHZ5 514 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 STX7O15400 261 aaKnown RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 CFLARO15519 480 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 CSKP41240 450 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 RHOAP61586 193 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 SH3BP2P78314 561 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 DDX53Q86TM3 631 aaKnown RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 PGAM4Q8N0Y7 254 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 BIRC8Q96P09 236 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 ZNF184Q99676 751 aaPredicted RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 NPAS2Q99743 824 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 RC3H2Q9HBD1 1191 aaKnown RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 SAGE1Q9NXZ1 904 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 VPS51Q9UID3 782 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 CPQQ9Y646 472 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 PPP6CO00743 305 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 OR1I1O60431 355 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 HSPA1AP0DMV8 641 aaKnown RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 HSPA1BP0DMV9 641 aaKnown RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 GFAPP14136 432 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 HDCP19113 662 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 RAD51Q06609 339 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 CDH18Q13634 790 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 ZRANB3Q5FWF4 1079 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 ATXN7L2Q5T6C5 722 aaPredicted RBP21.43■■□□□ 1.02
CLN6-224ENST00000638076 ANO7Q6IWH7 933 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 CYHR1Q6ZMK1 362 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 ADGRG6Q86SQ4 1221 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 KIAA1191Q96A73 305 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 WDR41Q9HAD4 459 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 IL21Q9HBE4 155 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 GALPQ9UBC7 116 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 OR51B4Q9Y5P0 310 aa21.43■■□□□ 1.02
CLN6-224ENST00000638076 LCHNA4D1U4 455 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 EIF4E1BA6NMX2 242 aaKnown RBP21.42■■□□□ 1.02
CLN6-224ENST00000638076 KERAO60938 352 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 GPC4O75487 556 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 MT-CO1P00395 513 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 LAG3P18627 525 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 SQLEQ14534 574 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 RNF111Q6ZNA4 994 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 CLYBLQ8N0X4 340 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 TTC30BQ8N4P2 665 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 HMGCLL1Q8TB92 370 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 STAG3L4Q8TBR4 150 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 IKZF3Q9UKT9 509 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 RNF112Q9ULX5 631 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 VPS9D1Q9Y2B5 631 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 PCDHB9Q9Y5E1 797 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 ANKRD36A6QL64 1941 aa21.42■■□□□ 1.02
CLN6-224ENST00000638076 ATP6AP2A0A1C7CYW4 349 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms