RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZFC3H1O60293 1989 aaKnown RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 A0A1W2PQM1 296 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 F5H423 210 aaPredicted RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 AGRPO00253 132 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 CST8O60676 142 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 HOXB3P14651 431 aaPredicted RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 NFKBIAP25963 317 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 HADHBP55084 474 aaKnown RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 MAZP56270 477 aaKnown RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 CCL7P80098 99 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 PDK1Q15118 436 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 PCSK7Q16549 785 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 TAZQ16635 292 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 LVRNQ6Q4G3 990 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 RAD9BQ6WBX8 426 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 MARK2Q7KZI7 788 aaKnown RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 VSIG1Q86XK7 387 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 Q8N9G6 341 aaPredicted RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 SPATA22Q8NHS9 363 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 PATE1Q8WXA2 126 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 SCG3Q8WXD2 468 aaKnown RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 EID2BQ96D98 161 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 HERPUD2Q9BSE4 406 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 DPEP2Q9H4A9 486 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
PNKP-230ENST00000638016 SATB2Q9UPW6 733 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 DUSP10Q9Y6W6 482 aa17.66■□□□□ 0.42
PNKP-230ENST00000638016 A0A087WV48 116 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 C1orf232A0A0U1RR37 186 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 PSTPIP1O43586 416 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 MT-CYBP00156 380 aaPredicted RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 SLC4A1P02730 911 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 ZNF30P17039 623 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 EIF2S3P41091 472 aaKnown RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 DPTQ07507 201 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 PRKD1Q15139 912 aaPredicted RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 TBC1D25Q3MII6 688 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 ODF2Q5BJF6 829 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 RBM44Q6ZP01 1051 aaKnown RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 LYSMD3Q7Z3D4 306 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 NDUFAF2Q8N183 169 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 ACRBPQ8NEB7 543 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 IMP4Q96G21 291 aaKnown RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 NAF1Q96HR8 494 aaKnown RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 TRIB3Q96RU7 358 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 C10orf88Q9H8K7 445 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 UBP1Q9NZI7 540 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 ATXN7L1Q9ULK2 861 aaPredicted RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 SLC17A4Q9Y2C5 497 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 OAS3Q9Y6K5 1087 aaKnown RBP17.65■□□□□ 0.42
PNKP-230ENST00000638016 RNF215Q9Y6U7 377 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 NBEAQ8NFP9 2946 aa17.65■□□□□ 0.42
PNKP-230ENST00000638016 hCG_1818297A0A087WSY0 165 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 FADS2P1A8MWK0 482 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
PNKP-230ENST00000638016 NTN3O00634 580 aaPredicted RBP17.64■□□□□ 0.41
PNKP-230ENST00000638016 PPP1R12AO14974 1030 aaPredicted RBP17.64■□□□□ 0.41
PNKP-230ENST00000638016 ATP1A1P05023 1023 aaKnown RBP17.64■□□□□ 0.41
PNKP-230ENST00000638016 RPLP0P05388 317 aaKnown RBP17.64■□□□□ 0.41
PNKP-230ENST00000638016 CES1P23141 567 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 PTPN3P26045 913 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 SPIDRQ14159 915 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 HLTFQ14527 1009 aaKnown RBP eCLIP17.64■□□□□ 0.41
PNKP-230ENST00000638016 NOMO1Q15155 1222 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 FOXR1Q6PIV2 292 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 OGFOD3Q6PK18 319 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 SLC30A9Q6PML9 568 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 ADAMTSL4Q6UY14 1074 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 GPBAR1Q8TDU6 330 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 MRFAP1L1Q96HT8 127 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 LYSMD1Q96S90 227 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 FOXP3Q9BZS1 431 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 SHOC2Q9UQ13 582 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 PRKAB1Q9Y478 270 aa17.64■□□□□ 0.41
PNKP-230ENST00000638016 SCN8AQ9UQD0 1980 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 A0A0U1RQJ8 604 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 ANKRD66B4E2M5 251 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 NDUFA10O95299 355 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 ZFXP17010 805 aaPredicted RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 CA4P22748 312 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 FECHP22830 423 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 TEAD1P28347 426 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 CD68P34810 354 aaPredicted RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 CYLC1P35663 651 aaPredicted RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 ADCY8P40145 1251 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 RPL26P61254 145 aaKnown RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 CTBSQ01459 385 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 WASHC5Q12768 1159 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 SPA17Q15506 151 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 C14orf28Q4W4Y0 310 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 CERCAMQ5T4B2 595 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 ALS2CLQ60I27 953 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 TMPRSS9Q7Z410 1059 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 PDZD3Q86UT5 571 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 NT5DC3Q86UY8 548 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 ZC3H18Q86VM9 953 aaKnown RBP17.63■□□□□ 0.41
PNKP-230ENST00000638016 CCDC50Q8IVM0 306 aa17.63■□□□□ 0.41
PNKP-230ENST00000638016 KATNAL2Q8IYT4 538 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms