RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 CADM4Q8NFZ8 388 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 HDAC10Q969S8 669 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 CDKN2AIPNLQ96HQ2 116 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 SGSM3Q96HU1 749 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 TBATAQ96M53 351 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 GPR174Q9BXC1 333 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 SEMA4AQ9H3S1 761 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 FAM83DQ9H4H8 585 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 LRRC4CQ9HCJ2 640 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 APPL1Q9UKG1 709 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 COQ6Q9Y2Z9 468 aa13.33□□□□□ -0.28
CHRNA4-216ENST00000636652 A0A0C4DFX4 3053 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 GLYATL1P3A0A0U1RQE8 302 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 CCDC162PA2VCL2 907 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 CCL22O00626 93 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 LATO43561 262 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ABHD2P08910 425 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ARNTP27540 789 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 SSTR1P30872 391 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 STX2P32856 288 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 PHBP35232 272 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ARCN1P48444 511 aaKnown RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 GPX6P59796 221 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 DPTQ07507 201 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 FGL2Q14314 439 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 KYNUQ16719 465 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 HENMT1Q5T8I9 393 aaKnown RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ALS2CLQ60I27 953 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 PDPK2PQ6A1A2 396 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ZNF449Q6P9G9 518 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 RFLNAQ6ZTI6 216 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 C3orf62Q6ZUJ4 267 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 CYS1Q717R9 158 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 MREGQ8N565 214 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 TRAM1L1Q8N609 369 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 FAM160A2Q8N612 972 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 FRMD1Q8N878 549 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 HNRNPLLQ8WVV9 542 aaKnown RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 NELL1Q92832 810 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 AP2M1Q96CW1 435 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 CERS2Q96G23 380 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 C1QTNF1Q9BXJ1 281 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 SLC17A9Q9BYT1 436 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ABCG8Q9H221 673 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 C6orf106Q9H6K1 298 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 VPS37BQ9H9H4 285 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 IL26Q9NPH9 171 aa13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 ARGLU1Q9NWB6 273 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 MBD1Q9UIS9 605 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-216ENST00000636652 TCRBV9S1A1TA0A576 114 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 GAPDHSO14556 408 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 RIPK2O43353 540 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 SRP72O76094 671 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 VAPBO95292 243 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 PRAMEF1O95521 474 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 ACSL3O95573 720 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 GOT2P00505 430 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 IGHV4-34P06331 123 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 PYGLP06737 847 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 H2AFXP16104 143 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 ITGALP20701 1170 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 MC4RP32245 332 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 XIAPP98170 497 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 PEX6Q13608 980 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 ANGPT1Q15389 498 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 FAM151BQ6UXP7 276 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 CAPN12Q6ZSI9 719 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 KCNMB4Q86W47 210 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 LMNTD2Q8IXW0 634 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 TP53I13Q8NBR0 393 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 OR6P1Q8NGX9 317 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 GABPB2Q8TAK5 448 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 LENG8Q96PV6 779 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 FAM167BQ9BTA0 163 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 ZSCAN5AQ9BUG6 496 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 RIOK2Q9BVS4 552 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 SUDS3Q9H7L9 328 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 C20orf96Q9NUD7 363 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 SMOXQ9NWM0 555 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 MOCS1Q9NZB8 636 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 CD84Q9UIB8 345 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 DMTF1Q9Y222 760 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 INVSQ9Y283 1065 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 FNDC3AQ9Y2H6 1198 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 SLC30A1Q9Y6M5 507 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 MUC3AQ02505 3323 aa13.31□□□□□ -0.28
CHRNA4-216ENST00000636652 A0A087WUV0 522 aaPredicted RBP13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 GOLGA8CPA6NN73 597 aa13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 MAP3K13O43283 966 aa13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 FSBPO95073 299 aa13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 PAK4O96013 591 aaPredicted RBP13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 SP9P0CG40 484 aa13.3□□□□□ -0.28
CHRNA4-216ENST00000636652 BCKDHBP21953 392 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms