RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 CPT1CQ8TCG5 803 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 DPEP2Q9H4A9 486 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 FGF10O15520 208 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 WASP42768 502 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 SLC13A2Q13183 592 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 DNASE1L3Q13609 305 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 NUP54Q7Z3B4 507 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 SYVN1Q86TM6 617 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 ZNF75CPQ92670 426 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 TCEAL3Q969E4 200 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 SLC6A15Q9H2J7 730 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 UPB1Q9UBR1 384 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 CLDN4O14493 209 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 AP3S2P59780 193 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 ZC3H10Q96K80 434 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 MLXQ9UH92 298 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 NKAPQ8N5F7 415 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 TRAPPC12Q8WVT3 735 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 HPF1Q9NWY4 346 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 BAIAP2Q9UQB8 552 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 MAP4K5Q9Y4K4 846 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 POLR3HQ9Y535 204 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 KCNE2Q9Y6J6 123 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
CACNA1A-225ENST00000636389 HSD17B2P37059 387 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 CDK7P50613 346 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 GAD1Q99259 594 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ZNF471Q9BX82 626 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 BRF2Q9HAW0 419 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 CIDEBQ9UHD4 219 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 LEF1Q9UJU2 399 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 TSPAN4O14817 238 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 PROSCO94903 275 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ADH1AP07327 375 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 CLCN7P51798 805 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 LRP8Q14114 963 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 TC2NQ8N9U0 490 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 EGFL7Q9UHF1 273 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ADGRL2O95490 1459 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 CTSKP43235 329 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ILF2Q12905 390 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 KYAT3Q6YP21 454 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 FAM83AQ86UY5 434 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 TREML1Q86YW5 311 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 OR52K2Q8NGK3 314 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 AKAP1Q92667 903 aaKnown RBP eCLIP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 C8orf48Q96LL4 319 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 OC90Q02509 493 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 HDDC3Q8N4P3 179 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 HELQQ8TDG4 1101 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ADGRL3Q9HAR2 1447 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ANXA2P2A6NMY6 339 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 WASHC1A8K0Z3 465 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 WASH3PC4AMC7 463 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ANXA2P07355 339 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 THRBP10828 461 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 SLC20A2Q08357 652 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 NAE1Q13564 534 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 WASH2PQ6VEQ5 465 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 EMID1Q96A84 441 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 WRAP53Q9BUR4 548 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 RECQL4O94761 1208 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 HSD11B1P28845 292 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 SDC2P34741 201 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 AMZ1Q400G9 498 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 PSTKQ8IV42 348 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 OR8H3Q8N146 312 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 PTGR2Q8N8N7 351 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 MED28Q9H204 178 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 ACTL7BQ9Y614 415 aa17.49■□□□□ 0.39
CACNA1A-225ENST00000636389 FAM240BA0A1B0GVZ2 78 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 INMTO95050 263 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 IL33O95760 270 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 RGS19P49795 217 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 CCZ1BP86790 482 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 CCZ1P86791 482 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 XIAPP98170 497 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 FAAP100Q0VG06 881 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 ZC3H12AQ5D1E8 599 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 IQSEC1Q6DN90 963 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 C17orf64Q86WR6 236 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 ZNF184Q99676 751 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 CERS4Q9HA82 394 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 MTHFD1P11586 935 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 CCNOP22674 350 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 ASMTP46597 345 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 LIX1Q8N485 282 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 MMADHCQ9H3L0 296 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 DNPEPQ9ULA0 475 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 H3BUI4 141 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 MAZP56270 477 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 SLC6A3Q01959 620 aa17.48■□□□□ 0.39
CACNA1A-225ENST00000636389 CFAP52Q8N1V2 620 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms