RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 NDST2P52849 883 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 YBEYP58557 167 aaPredicted RBP18.05■□□□□ 0.48
CLN6-212ENST00000636020 APBA1Q02410 837 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 HHEXQ03014 270 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 ZRANB3Q5FWF4 1079 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 TTI2Q6NXR4 508 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 RTL3Q8N8U3 475 aaKnown RBP18.05■□□□□ 0.48
CLN6-212ENST00000636020 THAP4Q8WY91 577 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 C19orf60Q96EN9 201 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 CCDC34Q96HJ3 373 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 UNKQ9C0B0 810 aaKnown RBP18.05■□□□□ 0.48
CLN6-212ENST00000636020 ATP13A3Q9H7F0 1226 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 UBA2Q9UBT2 640 aaPredicted RBP18.05■□□□□ 0.48
CLN6-212ENST00000636020 PADI1Q9ULC6 663 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 PCDHGB7Q9Y5F8 929 aa18.05■□□□□ 0.48
CLN6-212ENST00000636020 GOLGA6L3A6NEY3 463 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 GOLGA8SH3BPF8 625 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 KRT86O43790 486 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 NDUFA10O95299 355 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 EML2O95834 649 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 CCNYL3P0C7X3 344 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 SLC9A1P19634 815 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 GARSP41250 739 aaKnown RBP18.04■□□□□ 0.48
CLN6-212ENST00000636020 RGRP47804 291 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 POLR2LP62875 67 aaKnown RBP18.04■□□□□ 0.48
CLN6-212ENST00000636020 NFATC2Q13469 925 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 C2CD6Q53TS8 623 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 SLC6A19Q695T7 634 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 SRLQ86TD4 932 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 TMEM35BQ8NCS4 154 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 CT55Q8WUE5 264 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 OR2M4Q96R27 311 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 MFRPQ9BY79 579 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 ACTL8Q9H568 366 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 SARS2Q9NP81 518 aaKnown RBP18.04■□□□□ 0.48
CLN6-212ENST00000636020 APEX2Q9UBZ4 518 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 DNHD1Q96M86 4753 aa18.04■□□□□ 0.48
CLN6-212ENST00000636020 MN1Q10571 1320 aaPredicted RBP18.03■□□□□ 0.48
CLN6-212ENST00000636020 C21orf140B9A014 251 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 DPM1O60762 260 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
CLN6-212ENST00000636020 TEAD1P28347 426 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 EPHA4P54764 986 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 IL11RAQ14626 422 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 CHRNA6Q15825 494 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 UGT8Q16880 541 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 PARP15Q460N3 678 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 SMYD5Q6GMV2 418 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 CBARPQ8N350 705 aaPredicted RBP18.03■□□□□ 0.48
CLN6-212ENST00000636020 EMC1Q8N766 993 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 RBMXL3Q8N7X1 1067 aaKnown RBP18.03■□□□□ 0.48
CLN6-212ENST00000636020 SEC14L1Q92503 715 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 PNPLA2Q96AD5 504 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 ING2Q9H160 280 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 PDFQ9HBH1 243 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 ACSS2Q9NR19 701 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 KCTD5Q9NXV2 234 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 B4GALT6Q9UBX8 382 aa18.03■□□□□ 0.48
CLN6-212ENST00000636020 MED13LQ71F56 2210 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 FAM170AA1A519 330 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 CEACAM4O75871 244 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 MAPK9P45984 424 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 SH3BP2P78314 561 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 BCL2L1Q07817 233 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 STIM1Q13586 685 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 CNGA3Q16281 694 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 CDO1Q16878 200 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 C15orf59Q2T9L4 293 aaPredicted RBP18.02■□□□□ 0.48
CLN6-212ENST00000636020 PYCR3Q53H96 274 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 DOK6Q6PKX4 331 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 PLXDC1Q8IUK5 500 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 RASGRP3Q8IV61 690 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 SH3KBP1Q96B97 665 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 SNRNP40Q96DI7 357 aaKnown RBP18.02■□□□□ 0.48
CLN6-212ENST00000636020 DTD2Q96FN9 168 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 OR6C1Q96RD1 312 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 LHX9Q9NQ69 397 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 LNPEPQ9UIQ6 1025 aa18.02■□□□□ 0.48
CLN6-212ENST00000636020 CROCCQ5TZA2 2017 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 ANKUB1A6NFN9 424 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 ARGFXA6NJG6 315 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 J3KR12 359 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 FOXN3O00409 490 aaPredicted RBP18.01■□□□□ 0.47
CLN6-212ENST00000636020 TRAFD1O14545 582 aaPredicted RBP18.01■□□□□ 0.47
CLN6-212ENST00000636020 SPAG6O75602 509 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 GNA14O95837 355 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 EPHB2P29323 1055 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 CCDC14Q49A88 953 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 HPS6Q86YV9 775 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 MCEMP1Q8IX19 187 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 UMODL1-AS1Q8N2C9 162 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 CCDC185Q8N715 623 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 TSEN2Q8NCE0 465 aaKnown RBP18.01■□□□□ 0.47
CLN6-212ENST00000636020 C9orf72Q96LT7 481 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 RANBP9Q96S59 729 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 RUFY1Q96T51 708 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 EPB41L1Q9H4G0 881 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 ASF1BQ9NVP2 202 aa18.01■□□□□ 0.47
CLN6-212ENST00000636020 AJAP1Q9UKB5 411 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms