RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CLDN25C9JDP6 229 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 DFFAO00273 331 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 MATN3O15232 486 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 CNOT3O75175 753 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 DNAJB5O75953 348 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 CYP2C18P33260 490 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 LIPEQ05469 1076 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 GEN1Q17RS7 908 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 EML3Q32P44 896 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 ISCA2Q86U28 154 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 IGFN1Q86VF2 1251 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 PHYKPLQ8IUZ5 450 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 ARMC7Q9H6L4 198 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 HMG20AQ9NP66 347 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 HPS4Q9NQG7 708 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 GPRC5DQ9NZD1 345 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 SMIM28A0A1B0GU29 152 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 PIP5K1BO14986 540 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 MTHFD1P11586 935 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 TSPAN8P19075 237 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 POLR2IP36954 125 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 MRPL19P49406 292 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 KCNK10P57789 538 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 SH3BP2P78314 561 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 PCBP1Q15365 356 aaKnown RBP eCLIP14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 SKIV2LQ15477 1246 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 KANK2Q63ZY3 851 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 CHST15Q7LFX5 561 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 SPATA19Q7Z5L4 167 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 FAM35AQ86V20 835 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 ANKRD49Q8WVL7 239 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 TUBGCP3Q96CW5 907 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 MUS81Q96NY9 551 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 MROQ9BYG7 248 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 MID1IP1Q9NPA3 183 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 PDGFCQ9NRA1 345 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 GJD2Q9UKL4 321 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 SHROOM3Q8TF72 1996 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 WDR90Q96KV7 1748 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 SBF1O95248 1867 aa14.78□□□□□ -0.04
CACNA1A-220ENST00000635988 PMPCBO75439 489 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 CDK14O94921 469 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 WISP3O95389 354 aaPredicted RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 HGFP14210 728 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 HTR1EP28566 365 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 EEF1DP29692 281 aaKnown RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 AXLP30530 894 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 EIF2B2P49770 351 aaKnown RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 ALDH3A2P51648 485 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 CDC42EP1Q00587 391 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 BFSP2Q13515 415 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 OXA1LQ15070 435 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 Q3C1V9 767 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 GTF2IRD2BQ6EKJ0 949 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 THAP5Q7Z6K1 395 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 GTF2IRD2Q86UP8 949 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 TMCO5AQ8N6Q1 288 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 SCAIQ8N9R8 606 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 TAMM41Q96BW9 452 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 RDH12Q96NR8 316 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 SLC30A3Q99726 388 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 WDR12Q9GZL7 423 aaKnown RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 SLC52A3Q9NQ40 469 aa14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 FAM32AQ9Y421 112 aaKnown RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 GPC6Q9Y625 555 aaPredicted RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 OAS3Q9Y6K5 1087 aaKnown RBP14.77□□□□□ -0.04
CACNA1A-220ENST00000635988 DEAF1O75398 565 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 PAPSS2O95340 614 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 ALOX5P09917 674 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 KCNE1P15382 129 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 HOXB8P17481 243 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 RXRGP48443 463 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 GRB7Q14451 532 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 CRY1Q16526 586 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 CYP2A13Q16696 494 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 ZNF789Q5FWF6 425 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 XAF1Q6GPH4 301 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 TIGD7Q6NT04 549 aaPredicted RBP14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 IFNEQ86WN2 208 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 BPIFB6Q8NFQ5 453 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 CHID1Q9BWS9 393 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 LHPPQ9H008 270 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 NXF3Q9H4D5 531 aaKnown RBP14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 DAPK2Q9UIK4 370 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 PPP2R3BQ9Y5P8 575 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 SNX10Q9Y5X0 201 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 CPQQ9Y646 472 aa14.77□□□□□ -0.05
CACNA1A-220ENST00000635988 ASB14A6NK59 587 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 SYNCRIPO60506 623 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 TULP3O75386 442 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 NPPAP01160 153 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 FUT4P22083 530 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 HTR7P34969 479 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 ARSFP54793 590 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 LILRA4P59901 499 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 EPS8Q12929 822 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 DAG1Q14118 895 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 GPR158Q5T848 1215 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 TTC23Q5W5X9 447 aa14.76□□□□□ -0.05
CACNA1A-220ENST00000635988 TFAP2DQ7Z6R9 452 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms