RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 ZNF233A6NK53 670 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 TMCO5BA8MYB1 307 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 MIF4GDA9UHW6 222 aaKnown RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 PGRMC1O00264 195 aaKnown RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 PPFIA2O75334 1257 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 TRIM49P0CI25 452 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 TRIM49CP0CI26 452 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 CD19P15391 556 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 PECAM1P16284 738 aaPredicted RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 TNFRSF8P28908 595 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 NAMPTP43490 491 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 EFNA5P52803 228 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 AP3M2P53677 418 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 HOXA4Q00056 320 aaPredicted RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 SREBF2Q12772 1141 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 PPIL2Q13356 520 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 CLCA4Q14CN2 919 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 EMC2Q15006 297 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 UGCGQ16739 394 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 EPC2Q52LR7 807 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 PLA2G4FQ68DD2 849 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 MRNIPQ6NTE8 343 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 EMBQ6PCB8 327 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ANO5Q75V66 913 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ZNF571Q7Z3V5 609 aaPredicted RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 PEX26Q7Z412 305 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ZNF677Q86XU0 584 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 SFTPA1Q8IWL2 248 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 IFT20Q8IY31 132 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 TMEM161BQ8NDZ6 487 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 FBXL13Q8NEE6 735 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 SPATA4Q8NEY3 305 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 SUN3Q8TAQ9 357 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 U2AF1L4Q8WU68 220 aaKnown RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 C18orf8Q96DM3 657 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ZNF764Q96H86 408 aaPredicted RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 NTPCRQ9BSD7 190 aaKnown RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 EIF2AQ9BY44 585 aaKnown RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 SPATC1LQ9H0A9 340 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ZCWPW1Q9H0M4 648 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 POLR3FQ9H1D9 316 aaPredicted RBP7.42□□□□□ -1.22
LINC01108-202ENST00000635227 C2orf40Q9H1Z8 148 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ZNF446Q9NWS9 450 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 MGAT4CQ9UBM8 478 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 HDAC6Q9UBN7 1215 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 AGTPBP1Q9UPW5 1226 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 RIPK3Q9Y572 518 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 GPR179Q6PRD1 2367 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 RALGAPA2Q2PPJ7 1873 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 MCM3APO60318 1980 aa7.42□□□□□ -1.22
LINC01108-202ENST00000635227 ZNF236Q9UL36 1845 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 ANK1P16157 1881 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 MANSC4A6NHS7 340 aaPredicted RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 A8MVJ9 347 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 PODXLO00592 558 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 ATP9AO75110 1047 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 RTN2O75298 545 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 SEC31AO94979 1220 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 C1RP00736 705 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 GZMAP12544 262 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 EGR1P18146 543 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 MATR3P43243 847 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 SLC26A2P50443 739 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 RENBPP51606 427 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 GPC3P51654 580 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 HADHBP55084 474 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 VSNL1P62760 191 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 CCNA1P78396 465 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 MRPS5P82675 430 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 GCNT1Q02742 428 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 CYP24A1Q07973 514 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 C2orf54Q08AI8 447 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 CBWD6Q4V339 395 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 ARHGAP15Q53QZ3 475 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 CBWD3Q5JTY5 395 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 DGKKQ5KSL6 1271 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 CBWD5Q5RIA9 395 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 BEND6Q5SZJ8 279 aaPredicted RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 GRHL2Q6ISB3 625 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 NFRKBQ6P4R8 1299 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 BCDIN3DQ7Z5W3 292 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 ZBTB8OSQ8IWT0 167 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 UBL4BQ8N7F7 174 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 EIF1ADQ8N9N8 165 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 NOA1Q8NC60 698 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 FAM71BQ8TC56 605 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 AFAP1L1Q8TED9 768 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 OPTNQ96CV9 577 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 DAZAP1Q96EP5 407 aaKnown RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 RUNDC3BQ96NL0 473 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 SNX18Q96RF0 628 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 AGPAT1Q99943 283 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 CBWD1Q9BRT8 395 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 FUT8Q9BYC5 575 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 TTYH1Q9H313 450 aaPredicted RBP7.41□□□□□ -1.22
LINC01108-202ENST00000635227 MROH8Q9H579 483 aa7.41□□□□□ -1.22
LINC01108-202ENST00000635227 UBE2TQ9NPD8 197 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms