RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF548Q8NEK5 533 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TRPV1Q8NER1 839 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NOC3LQ8WTT2 800 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ARHGAP45Q92619 1136 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 AKAP1Q92667 903 aaKnown RBP eCLIP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF845Q96IR2 970 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 DEFB118Q96PH6 123 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NR1H4Q96RI1 486 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 MMS19Q96T76 1030 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 CLSTN3Q9BQT9 956 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NUDT16L1Q9BRJ7 211 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 CTDSP1Q9GZU7 261 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 PORCNQ9H237 461 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 CCDC68Q9H2F9 335 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 MROH8Q9H579 483 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 SEMA4BQ9NPR2 832 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TLR8Q9NR97 1041 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 SMYD2Q9NRG4 433 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ZDHHC7Q9NXF8 308 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 KCND2Q9NZV8 630 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 KLQ9UEF7 1012 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ADAMTS5Q9UNA0 930 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 CAMK2AQ9UQM7 478 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 OSGIN2Q9Y236 505 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 B3GNT3Q9Y2A9 372 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 PSAT1Q9Y617 370 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 PIAS3Q9Y6X2 628 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ZHX2Q9Y6X8 837 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNFX1Q9P2E3 1918 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 MUC6Q6W4X9 2439 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 MCM3APO60318 1980 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF292O60281 2723 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ATG2AQ2TAZ0 1938 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 MYH4Q9Y623 1939 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 BRWD1Q9NSI6 2320 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 A0A1W2PQM1 296 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 PRYO14603 147 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 DSCR3O14972 297 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CCNT1O60563 726 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CCNDBP1O95273 360 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 MLYCDO95822 493 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC3A2P08195 630 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ASNSP08243 561 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 UBTFL1P0CB47 393 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 PSG1P11464 419 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CYP2A6P11509 494 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 LYL1P12980 280 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CYBAP13498 195 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CYP4B1P13584 511 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 COX7A2P14406 83 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 PKMP14618 531 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXB9P17482 250 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ATF7P17544 494 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 FPR3P25089 353 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CCND3P30281 292 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXD12P35452 270 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GJC1P36383 396 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ARL3P36405 182 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 MLH1P40692 756 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 STAT6P42226 847 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF84P51523 738 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 COPB1P53618 953 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 RARSP54136 660 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 OAZ1P54368 228 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ADPRHP54922 357 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 BACE1P56817 501 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC37A1P57057 533 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 TIMM10P62072 90 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 IRX6P78412 446 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ARHGAP8P85298 464 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXA4Q00056 320 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 TFCP2Q12800 502 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SPP2Q13103 211 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GAB1Q13480 694 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 MVPQ14764 893 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 NAA25Q14CX7 972 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 TBCEQ15813 527 aaPredicted RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CNGA3Q16281 694 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CCL14Q16627 93 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GXYLT1Q4G148 440 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GLE1Q53GS7 698 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SH2D4BQ5SQS7 431 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF280DQ6N043 979 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 MTFR2Q6P444 385 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GJB7Q6PEY0 223 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC22A25Q6T423 547 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 BCDIN3DQ7Z5W3 292 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GPR142Q7Z601 462 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 PXKQ7Z7A4 578 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 GALNT7Q86SF2 657 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 DZIP1Q86YF9 867 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 CCDC105Q8IYK2 499 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 OR8H2Q8N162 312 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 DEFB123Q8N688 67 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 EXD3Q8N9H8 876 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 C1orf131Q8NDD1 294 aaKnown RBP2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 ETNPPLQ8TBG4 499 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 METTL6Q8TCB7 284 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM255BQ8WV15 326 aa2.62□□□□□ -1.99
SMARCB1-208ENST00000634926 IGFBPL1Q8WX77 278 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms