RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 N4BP2L1Q5TBK1 243 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 GRTP1Q5TC63 336 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 C22orf39Q6P5X5 142 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SYT13Q7L8C5 426 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 STRA8Q7Z7C7 330 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 KBTBD6Q86V97 674 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ZC3HC1Q86WB0 502 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SFTPA1Q8IWL2 248 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ANKRD42Q8N9B4 389 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 LPCAT1Q8NF37 534 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 OR13C4Q8NGS5 318 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 MGARPQ8TDB4 240 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 FRS2Q8WU20 508 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 DYDC1Q8WWB3 177 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PIH1D2Q8WWB5 315 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 PEX13Q92968 403 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ISG20Q96AZ6 181 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SGSM3Q96HU1 749 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 DNAJC1Q96KC8 554 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF317Q96PQ6 595 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 P2RY13Q9BPV8 354 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 CCDC134Q9H6E4 229 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SUDS3Q9H7L9 328 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC17A7Q9P2U7 560 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 EBF1Q9UH73 591 aa9.51□□□□□ -0.89
PDLIM5-223ENST00000627587 DNAH14Q0VDD8 3507 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 TULP3O75386 442 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 PGLSO95336 258 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 APBB3O95704 486 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 CRTAMO95727 393 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 AHSGP02765 367 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 POLR2EP19388 210 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 SPRP35270 261 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC1A2P43004 574 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 ETV4P43268 484 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 DGKGP49619 791 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 PGGT1BP53609 377 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 EPHB1P54762 984 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 CSE1LP55060 971 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 PRAMEP78395 509 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 MPP1Q00013 466 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 BCL2L1Q07817 233 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 SF3A2Q15428 464 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 UGP2Q16851 508 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 PLK5Q496M5 336 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 MBLAC2Q68D91 279 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 SPNS2Q8IVW8 549 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 PHTF2Q8N3S3 785 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 RYBPQ8N488 228 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 TTC30BQ8N4P2 665 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 C2CD4AQ8NCU7 369 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 CALML6Q8TD86 181 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 TCP10LQ8TDR4 215 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 ATXN7L3BQ96GX2 97 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 APOPT1Q96IL0 206 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 FAM167BQ9BTA0 163 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 CEP44Q9C0F1 390 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 C2orf42Q9NWW7 574 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 MKS1Q9NXB0 559 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 MARCH4Q9P2E8 410 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 LRRK1Q38SD2 2015 aa9.5□□□□□ -0.89
PDLIM5-223ENST00000627587 ANTXRLA6NF34 631 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PRRT4C9JH25 899 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TPP1O14773 563 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TIMM44O43615 452 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SOCS5O75159 536 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ZWINTO95229 277 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 KCNK5O95279 499 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 EGFP01133 1207 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 DHRS4L1P0CG22 281 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 FOXN2P32314 431 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GJA4P35212 333 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 MPLP40238 635 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 NNMTP40261 264 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SLC6A11P48066 632 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PDE1BQ01064 536 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PDE1CQ14123 709 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SEMA3AQ14563 771 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 SEPT7Q16181 437 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CDKN3Q16667 212 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ACCSLQ4AC99 568 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ARMC12Q5T9G4 340 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ZNF470Q6ECI4 717 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 NEPROQ6NW34 567 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 DPY19L3Q6ZPD9 716 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 GLT6D1Q7Z4J2 308 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CMC1Q7Z7K0 106 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 TAX1BP1Q86VP1 789 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PCDH20Q8N6Y1 951 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PAF1Q8N7H5 531 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 WFIKKN2Q8TEU8 576 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 STYXQ8WUJ0 223 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 CYB5D2Q8WUJ1 264 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 PTPRN2Q92932 1015 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 HDAC10Q969S8 669 aa9.49□□□□□ -0.89
PDLIM5-223ENST00000627587 ECHDC3Q96DC8 303 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms