RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 OSCP1Q8WVF1 389 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 ANKRD49Q8WVL7 239 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 CELF6Q96J87 481 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 FICDQ9BVA6 458 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 HERC2P3Q9BVR0 1158 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 ADNPQ9H2P0 1102 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 MUC13Q9H3R2 512 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 WDR6Q9NNW5 1121 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 AKIP1Q9NQ31 210 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 RNF19AQ9NV58 838 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 DNMT3BQ9UBC3 853 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 PCDHGA11Q9Y5H2 935 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 SNX10Q9Y5X0 201 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 MYLKQ15746 1914 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 PLXNA1Q9UIW2 1896 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 UGT2B4P06133 528 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 IL7RP16871 459 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 KCNC1P48547 511 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 CDH13P55290 713 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 IFITM3Q01628 133 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 SCAPQ12770 1279 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 ACAP2Q15057 778 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 SPATS1Q496A3 300 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 UNC50Q53HI1 259 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 AGAP7PQ5VUJ5 663 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 IL31Q6EBC2 164 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 TMEM214Q6NUQ4 689 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 SNX29P2Q8IUI4 249 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 PHYKPLQ8IUZ5 450 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 KLHDC8BQ8IXV7 354 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 SLC7A5P1Q8MH63 180 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 TTC30BQ8N4P2 665 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 PDZD8Q8NEN9 1154 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 SLC22A17Q8WUG5 538 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 COPS5Q92905 334 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 NTAN1Q96AB6 310 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 L3HYPDHQ96EM0 354 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 SLC9A7Q96T83 725 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 CHID1Q9BWS9 393 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 TRIM54Q9BYV2 358 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 WDR12Q9GZL7 423 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 SLC52A3Q9NQ40 469 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 TREX1Q9NSU2 369 aa14.09□□□□□ -0.15
LDB3-209ENST00000623056 AAR2Q9Y312 384 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 RBMX2Q9Y388 322 aaKnown RBP14.09□□□□□ -0.15
LDB3-209ENST00000623056 SBF1O95248 1867 aa14.08□□□□□ -0.15
LDB3-209ENST00000623056 TSC2P49815 1807 aa14.08□□□□□ -0.15
LDB3-209ENST00000623056 PIP5K1BO14986 540 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 CACNG3O60359 315 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 HUS1O60921 280 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 BEST1O76090 585 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 MATN4O95460 622 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 LEPRP48357 1165 aaKnown RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 SLC26A2P50443 739 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 ARSFP54793 590 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 SH3BP2P78314 561 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 TRIM32Q13049 653 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 NFYCQ13952 458 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 SKIV2LQ15477 1246 aaKnown RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 KCNJ8Q15842 424 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 PHKG1Q16816 387 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 RBM48Q5RL73 367 aaKnown RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 NEPROQ6NW34 567 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 BLOC1S3Q6QNY0 202 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 TFAP2DQ7Z6R9 452 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 MINDY2Q8NBR6 621 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 BDH2Q9BUT1 245 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 ALG9Q9H6U8 611 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 SNTG2Q9NY99 539 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 OAS3Q9Y6K5 1087 aaKnown RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 CLDN5O00501 218 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 PPP6CO00743 305 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 PFDN6O15212 129 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 FYNP06241 537 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 HTR1AP08908 422 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 ALOX5P09917 674 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 HTR1BP28222 390 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 AIF1P55008 147 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 POLD3Q15054 466 aaPredicted RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 FUT11Q495W5 492 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 COQ5Q5HYK3 327 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 C9orf57Q5W0N0 161 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 KIAA0930Q6ICG6 404 aaPredicted RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 THAP5Q7Z6K1 395 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 PNPLA1Q8N8W4 532 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 BPIFB1Q8TDL5 484 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 TWIST2Q8WVJ9 160 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 BIRC7Q96CA5 298 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 UBXN10Q96LJ8 280 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 DGCR6LQ9BY27 220 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 KLHL25Q9H0H3 589 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 PLEKHA5Q9HAU0 1116 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 NTN4Q9HB63 628 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 SDR39U1Q9NRG7 319 aaPredicted RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 SCHIP1Q9P0W5 487 aaPredicted RBP14.08□□□□□ -0.16
LDB3-209ENST00000623056 ENPP5Q9UJA9 477 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 FBXW11Q9UKB1 542 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 GJD2Q9UKL4 321 aa14.08□□□□□ -0.16
LDB3-209ENST00000623056 USP22Q9UPT9 525 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms