RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 UGT1A5P35504 534 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 TUBA4AP68366 448 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 PIGFQ07326 219 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 TIGD2Q4W5G0 525 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 LIMS2Q7Z4I7 341 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 CIR1Q86X95 450 aaPredicted RBP15.74■□□□□ 0.11
NPHP4-211ENST00000622020 ZC3H7AQ8IWR0 971 aaKnown RBP15.74■□□□□ 0.11
NPHP4-211ENST00000622020 ADGRG5Q8IZF4 528 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 DHRSXQ8N5I4 330 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 ADNPQ9H2P0 1102 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 ARMC1Q9NVT9 282 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 NEU3Q9UQ49 428 aa15.74■□□□□ 0.11
NPHP4-211ENST00000622020 SH3PXD2BA1X283 911 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 H0YJX3 145 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 AZIN1O14977 448 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 ZBTB11O95625 1053 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 MYL3P08590 195 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 LEPRP48357 1165 aaKnown RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 AAK1Q2M2I8 961 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 SLC36A3Q495N2 470 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 RAB41Q5JT25 222 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 LRRTM3Q86VH5 581 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 SLC22A9Q8IVM8 553 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 SCN4BQ8IWT1 228 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 LZTR1Q8N653 840 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 OR13C4Q8NGS5 318 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 ALG2Q9H553 416 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 ZFYVE28Q9HCC9 887 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 INTS7Q9NVH2 962 aaKnown RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 UXTQ9UBK9 157 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 POLG2Q9UHN1 485 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 SUPT3HB4E1H0 165 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 S1PR4O95977 384 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 GSK3BP49841 420 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 UFM1P61960 85 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 HERVK_113P63132 956 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 LIPEQ05469 1076 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 GALNT3Q14435 633 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 GPC2Q8N158 579 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 PDZD8Q8NEN9 1154 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 GPR152Q8TDT2 470 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 PGAP3Q96FM1 320 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 CENPNQ96H22 339 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 TSGA13Q96PP4 275 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 KCTD14Q9BQ13 255 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 ERVK-6Q9BXR3 956 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 RRN3P2A6NIE6 340 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 ACOX3O15254 700 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 CACNG3O60359 315 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 CNTN5O94779 1100 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 HMBSP08397 361 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 MYF6P23409 242 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 AGTR2P50052 363 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 CCT8P50990 548 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 CLCN5P51795 746 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 CBX3Q13185 183 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 C8orf82Q6P1X6 216 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 LRRC43Q8N309 656 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 PSMG2Q969U7 264 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 PPP1R10Q96QC0 940 aaKnown RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 SMIM14Q96QK8 99 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 GPATCH1Q9BRR8 931 aaKnown RBP15.73■□□□□ 0.11
NPHP4-211ENST00000622020 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 ZNF232Q9UNY5 417 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 LOC285556D6RIA3 1793 aa15.73■□□□□ 0.11
NPHP4-211ENST00000622020 C1orf232A0A0U1RR37 186 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 E9PAM4 449 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 CLASP2O75122 1294 aaKnown RBP15.72■□□□□ 0.11
NPHP4-211ENST00000622020 MATN1P21941 496 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 MAP4P27816 1152 aaKnown RBP15.72■□□□□ 0.11
NPHP4-211ENST00000622020 IST1P53990 364 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 YWHAHQ04917 246 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-211ENST00000622020 SEMA3AQ14563 771 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 C1QTNF12Q5T7M4 302 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 ZNF549Q6P9A3 640 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 TSPAN17Q96FV3 270 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 HMCESQ96FZ2 354 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 MUS81Q96NY9 551 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 BIRC8Q96P09 236 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 CDK15Q96Q40 435 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 CYP2S1Q96SQ9 504 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 C9orf16Q9BUW7 83 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 VPS45Q9NRW7 570 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 POLR3BQ9NW08 1133 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-211ENST00000622020 ACTL7AQ9Y615 435 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 THP07101 528 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 EEF1DP29692 281 aaKnown RBP15.72■□□□□ 0.11
NPHP4-211ENST00000622020 GRIK1P39086 918 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 LHX1P48742 406 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 C21orf59P57076 290 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 PPIL2Q13356 520 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 SLC44A4Q53GD3 710 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 ABRAXAS1Q6UWZ7 409 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 ROPN1LQ96C74 230 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 CATSPERBQ9H7T0 1116 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 FANCEQ9HB96 536 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 SELENONQ9NZV5 590 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 HS3ST4Q9Y661 456 aa15.72■□□□□ 0.11
NPHP4-211ENST00000622020 A0A0U1RQS6 177 aa15.71■□□□□ 0.11
NPHP4-211ENST00000622020 FAM155AB1AL88 458 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms