RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	RNF217	Q8TC41	542 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	FAM110B	Q8TC76	370 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	TWIST2	Q8WVJ9	160 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	TUBGCP3	Q96CW5	907 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	AARSD1	Q9BTE6	412 aa	Known RBP	11.18	□□□□□ -0.62
TP53-223	ENST00000618944	TRMO	Q9BU70	441 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	SLC25A23	Q9BV35	468 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	TRIM8	Q9BZR9	551 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	TRIM4	Q9C037	500 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	PDF	Q9HBH1	243 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	BPIFA1	Q9NP55	256 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	GKN1	Q9NS71	199 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	ABT1	Q9ULW3	272 aa	Known RBP	11.18	□□□□□ -0.62
TP53-223	ENST00000618944	TIMM22	Q9Y584	194 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	PCDHGC4	Q9Y5F7	938 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944	SNX13	Q9Y5W8	968 aa		11.18	□□□□□ -0.62
TP53-223	ENST00000618944		A0A0J9YYE9	177 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	OR6C75	A6NL08	312 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CDC7	O00311	574 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	AZIN1	O14977	448 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ADAM12	O43184	909 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CLASP2	O75122	1294 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SRP72	O76094	671 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ATP6V1B1	P15313	513 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	RPL17	P18621	184 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	MAPKAPK2	P49137	400 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	STC1	P52823	247 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	YBX1	P67809	324 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ACVR1	Q04771	509 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	TSN	Q15631	228 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	GALNT15	Q8N3T1	639 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	MARVELD2	Q8N4S9	558 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	MDGA1	Q8NFP4	955 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	GPR150	Q8NGU9	434 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ESAM	Q96AP7	390 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SLCO4A1	Q96BD0	722 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CINP	Q9BW66	212 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	TUBB1	Q9H4B7	451 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944		Q9H521	79 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	COQ10B	Q9H8M1	238 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SUCO	Q9UBS9	1254 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	RNF112	Q9ULX5	631 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	LZTS1	Q9Y250	596 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	PCDHB7	Q9Y5E2	793 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SQOR	Q9Y6N5	450 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SLC38A8	A6NNN8	435 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CBX4	O00257	560 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ENPP3	O14638	875 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	OR1I1	O60431	355 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	NDUFS3	O75489	264 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	NDST3	O95803	873 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	EPO	P01588	193 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CST5	P28325	142 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	HOXD9	P28356	352 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SOX11	P35716	441 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SGSH	P51688	502 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	TNK2	Q07912	1038 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	GPR17	Q13304	367 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CAPRIN1	Q14444	709 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SETMAR	Q53H47	684 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	C16orf59	Q7L2K0	433 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	GLT6D1	Q7Z4J2	308 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	HERC6	Q8IVU3	1022 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	NAT14	Q8WUY8	206 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	PPWD1	Q96BP3	646 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ZNF512	Q96ME7	567 aa	Predicted RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ATOH8	Q96SQ7	321 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	SLC30A3	Q99726	388 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	NOL11	Q9H8H0	719 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	MARCH5	Q9NX47	278 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	TMEM181	Q9P2C4	612 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	MAP10	Q9P2G4	905 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	CD300A	Q9UGN4	299 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	TSR3	Q9UJK0	312 aa	Known RBP	11.17	□□□□□ -0.62
TP53-223	ENST00000618944	RAB26	Q9ULW5	256 aa		11.17	□□□□□ -0.62
TP53-223	ENST00000618944	ZNF839	A8K0R7	811 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	ACSL4	O60488	711 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CRCP	O75575	148 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	IRF1	P10914	325 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	PIM1	P11309	404 aa	Predicted RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	HGF	P14210	728 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	NELFE	P18615	380 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	ATF6	P18850	670 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CHRM3	P20309	590 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	PRDX3	P30048	256 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	ATP5C1	P36542	298 aa	Known RBP	11.16	□□□□□ -0.62
TP53-223	ENST00000618944	AGTR2	P50052	363 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	OXCT1	P55809	520 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	NFKB2	Q00653	900 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	RHD	Q02161	417 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	RPS6KA2	Q15349	733 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	FUT10	Q6P4F1	479 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	LINGO4	Q6UY18	593 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	EFHB	Q8N7U6	833 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CATSPER1	Q8NEC5	780 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	LPCAT1	Q8NF37	534 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	DBF4B	Q8NFT6	615 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	CASD1	Q96PB1	797 aa		11.16	□□□□□ -0.62
TP53-223	ENST00000618944	TRIB3	Q96RU7	358 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms