RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 C1orf232A0A0U1RR37 186 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 LMO7DNF2Z398 122 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 H3BM21 787 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CACNB4O00305 520 aaPredicted RBP8.22□□□□□ -1.09
NEK3-209ENST00000618856 PDE2AO00408 941 aaPredicted RBP8.22□□□□□ -1.09
NEK3-209ENST00000618856 AURKAO14965 403 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 ZSCAN12O43309 604 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 AQP9O43315 295 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 SIGLEC6O43699 453 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PMPCBO75439 489 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 ANXA9O76027 345 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 RASGRP1O95267 797 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 METTL18O95568 372 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FGF1P05230 155 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FTH1P19P0C7X4 201 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CKMT1AP12532 417 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 JUNDP17535 347 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 KELP23276 732 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PSMA3P25788 255 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PSMB4P28070 264 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CHRNA4P43681 627 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 ACADVLP49748 655 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 BLKP51451 505 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 SRP54P61011 504 aaKnown RBP8.22□□□□□ -1.09
NEK3-209ENST00000618856 SIM1P81133 766 aaPredicted RBP8.22□□□□□ -1.09
NEK3-209ENST00000618856 CDK3Q00526 305 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PPARDQ03181 441 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 ILKQ13418 452 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PCSK7Q16549 785 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CCNG2Q16589 344 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PARP6Q2NL67 630 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 P3H1Q32P28 736 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 SEL1L2Q5TEA6 688 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CCDC181Q5TID7 509 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PDPK2PQ6A1A2 396 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 LVRNQ6Q4G3 990 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 LYSMD3Q7Z3D4 306 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 HEATR4Q86WZ0 1026 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PHACTR4Q8IZ21 702 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 RBFAQ8N0V3 343 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FSTL5Q8N475 847 aaPredicted RBP8.22□□□□□ -1.09
NEK3-209ENST00000618856 EID2Q8N6I1 236 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 OR56A4Q8NGH8 313 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 CCDC110Q8TBZ0 833 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 OR1E3Q8WZA6 343 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 SLC39A7Q92504 469 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 SCAMP4Q969E2 229 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 AP2M1Q96CW1 435 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PDXPQ96GD0 296 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 PLEKHG4BQ96PX9 1271 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FERMT1Q9BQL6 677 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 BOCQ9BWV1 1114 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FAM83DQ9H4H8 585 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 WDR26Q9H7D7 661 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 ZFYVE1Q9HBF4 777 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FGF22Q9HCT0 170 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 KCND1Q9NSA2 647 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 HACD3Q9P035 362 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 IL17CQ9P0M4 197 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 METRNQ9UJH8 293 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 DRG1Q9Y295 367 aaKnown RBP8.22□□□□□ -1.09
NEK3-209ENST00000618856 ZNF711Q9Y462 761 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 FREM2Q5SZK8 3169 aa8.22□□□□□ -1.09
NEK3-209ENST00000618856 NEMP2A6NFY4 417 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 AGAP14A8MT82 685 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 FADS2P1A8MWK0 482 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 CES2O00748 559 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 GAPDHSO14556 408 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 ENC1O14682 589 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 YY2O15391 372 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 SDC3O75056 442 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 STK10O94804 968 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 SUN1O94901 812 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 LDOC1O95751 146 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 AGTP01019 485 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 IVLP07476 585 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 CDK4P11802 303 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 BPIP17213 487 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 CKMT2P17540 419 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 GEMP55040 296 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 SMAD1Q15797 465 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 ZCCHC8Q6NZY4 707 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 OGFOD3Q6PK18 319 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 ENPP7Q6UWV6 458 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 C17orf82Q86X59 251 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 TRAM1L1Q8N609 369 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 PAF1Q8N7H5 531 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 PRELID2Q8N945 189 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 FAM71DQ8N9W8 422 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 GPR26Q8NDV2 337 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 IPMKQ8NFU5 416 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 CCHCR1Q8TD31 782 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 GPBAR1Q8TDU6 330 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 ATG4AQ8WYN0 398 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 TSACCQ96A04 125 aaPredicted RBP8.21□□□□□ -1.1
NEK3-209ENST00000618856 HIC2Q96JB3 615 aa8.21□□□□□ -1.1
NEK3-209ENST00000618856 CNDP2Q96KP4 475 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms