RNA–Protein interactions for RNA: ENST00000617560.1

PHF20-216, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-216ENST00000617560 RASA4O43374 803 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
PHF20-216ENST00000617560 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
PHF20-216ENST00000617560 ERCC5P28715 1186 aaPredicted RBP13.16□□□□□ -0.3
PHF20-216ENST00000617560 CLCN1P35523 988 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 SCNN1AP37088 669 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 GABRB2P47870 512 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 GFERP55789 205 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 HHEXQ03014 270 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 GRM3Q14832 879 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 SLC6A19Q695T7 634 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 KLHL10Q6JEL2 608 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 TTI2Q6NXR4 508 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 MARK2Q7KZI7 788 aaKnown RBP13.16□□□□□ -0.3
PHF20-216ENST00000617560 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 RASGRP3Q8IV61 690 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 PYROXD2Q8N2H3 581 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 SFRP1Q8N474 314 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 OR2M4Q96R27 311 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
PHF20-216ENST00000617560 B4GALT6Q9UBX8 382 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 LNPEPQ9UIQ6 1025 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 TMEM98Q9Y2Y6 226 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
PHF20-216ENST00000617560 PCDHGA6Q9Y5G7 932 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
PHF20-216ENST00000617560 J3KR12 359 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 PSMA7O14818 248 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 NDUFA10O95299 355 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 CBX6O95503 412 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 IVLP07476 585 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 SERPINA4P29622 427 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 LEPRP48357 1165 aaKnown RBP13.15□□□□□ -0.3
PHF20-216ENST00000617560 SEPHS1P49903 392 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 PEX6Q13608 980 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 PAPD7Q5XG87 772 aaKnown RBP13.15□□□□□ -0.3
PHF20-216ENST00000617560 SRLQ86TD4 932 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
PHF20-216ENST00000617560 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.3
PHF20-216ENST00000617560 TMEM35BQ8NCS4 154 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 ECHDC3Q96DC8 303 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 NSMCE3Q96MG7 304 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 GSDMAQ96QA5 445 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 OR6C1Q96RD1 312 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 TUBGCP5Q96RT8 1024 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 RANBP9Q96S59 729 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 ING2Q9H160 280 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 RETREG1Q9H6L5 497 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 ATP13A3Q9H7F0 1226 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
PHF20-216ENST00000617560 ACSS2Q9NR19 701 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 METTL5Q9NRN9 209 aaKnown RBP13.15□□□□□ -0.3
PHF20-216ENST00000617560 ASF1BQ9NVP2 202 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 DCHS2Q6V1P9 2916 aa13.15□□□□□ -0.3
PHF20-216ENST00000617560 SVILO95425 2214 aa13.15□□□□□ -0.31
PHF20-216ENST00000617560 NFKBIAP25963 317 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 EPHB2P29323 1055 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 ETV3P41162 512 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 CHRNA6Q15825 494 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 CNGA3Q16281 694 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 ZRANB3Q5FWF4 1079 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 RAET1GQ6H3X3 334 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 MCEMP1Q8IX19 187 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 RBMXL3Q8N7X1 1067 aaKnown RBP13.14□□□□□ -0.31
PHF20-216ENST00000617560 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 SNRNP40Q96DI7 357 aaKnown RBP13.14□□□□□ -0.31
PHF20-216ENST00000617560 PDCL3Q9H2J4 239 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 TMEM51Q9NW97 253 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 APEX2Q9UBZ4 518 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 PADI1Q9ULC6 663 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
PHF20-216ENST00000617560 PKDREJQ9NTG1 2253 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 FOXN3O00409 490 aaPredicted RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 LRCH4O75427 683 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 TIAF1O95411 115 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 GARSP41250 739 aaKnown RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 MARSP56192 900 aaKnown RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 STX17P56962 302 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 BCL2L1Q07817 233 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 IL10RAQ13651 578 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 PTPRRQ15256 657 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 CCDC14Q49A88 953 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 FAM199XQ6PEV8 388 aaPredicted RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 HSD11B1LQ7Z5J1 315 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 DTD2Q96FN9 168 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 SCARF2Q96GP6 870 aaPredicted RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 PDFQ9HBH1 243 aa13.13□□□□□ -0.31
PHF20-216ENST00000617560 SARS2Q9NP81 518 aaKnown RBP13.13□□□□□ -0.31
PHF20-216ENST00000617560 LHX9Q9NQ69 397 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms