RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SULT2A1Q06520 285 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PTPRCAPQ14761 206 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 TRIP4Q15650 581 aaPredicted RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PGM2L1Q6PCE3 622 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPRIN3Q6ZVF9 776 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 MICU2Q8IYU8 434 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CBR4Q8N4T8 237 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 TSPAN14Q8NG11 270 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 MAGEE2Q8TD90 523 aaPredicted RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 SNX19Q92543 992 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAM120BQ96EK7 910 aaKnown RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PGAP3Q96FM1 320 aaPredicted RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 NOL11Q9H8H0 719 aaKnown RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 A0A088AWK7 358 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PCNAP12004 261 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 EPB42P16452 691 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRDX6P30041 224 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCNHP51946 323 aaPredicted RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 NDST2P52849 883 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 NUP107P57740 925 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 IRF8Q02556 426 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 BCL2L1Q07817 233 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 BOP1Q14137 746 aaKnown RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PABPC1LQ4VXU2 614 aaKnown RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZNF789Q5FWF6 425 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 LINGO4Q6UY18 593 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZDHHC13Q8IUH4 622 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PSKH2Q96QS6 385 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CIPCQ9C0C6 399 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARL15Q9NXU5 204 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 OPTCQ9UBM4 332 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 FKBPLQ9UIM3 349 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ANAPC2Q9UJX6 822 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 PCDHB8Q9UN66 801 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 COMMD3-BMI1R4GMX3 469 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CHD4Q14839 1912 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 C1orf232A0A0U1RR37 186 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 A8MX80 341 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 RAD51BO15315 384 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 RPP40O75818 363 aaKnown RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 MYO1DO94832 1006 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ATP6V1B2P21281 511 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLC26A3P40879 764 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 POLD2P49005 469 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ECT2LQ008S8 904 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CLCQ05315 142 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 FAPQ12884 760 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 SEMA3BQ13214 749 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 AP5B1Q2VPB7 878 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 SH2D5Q6ZV89 423 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CLVS1Q8IUQ0 354 aaPredicted RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 VPS50Q96JG6 964 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 SH3GL1Q99961 368 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 TBCDQ9BTW9 1192 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CCSER2Q9H7U1 834 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZFP14Q9HCL3 533 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 FNIP2Q9P278 1114 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 CDV3Q9UKY7 258 aaKnown RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ARIH1Q9Y4X5 557 aaPredicted RBP5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 RAI2Q9Y5P3 530 aa5.63□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACACAQ13085 2346 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SLX4Q8IY92 1834 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 I6L893 689 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 HAS3O00219 553 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SEC22BO75396 215 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MLYCDO95822 493 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 LINC00032P0C843 101 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 IDO1P14902 403 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 GABRB3P28472 473 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 EEF1DP29692 281 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PIK3CGP48736 1102 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 MAPKAPK2P49137 400 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 DIO3P55073 304 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PRKCZQ05513 592 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACSM2AQ08AH3 577 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ACSM2BQ68CK6 577 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 PAOXQ6QHF9 649 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 C16orf59Q7L2K0 433 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SCD5Q86SK9 330 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 HERC6Q8IVU3 1022 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 CPSF7Q8N684 471 aaKnown RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 UPF1Q92900 1129 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■□□□□ 10.6
SYNCRIP-204ENST00000616122 C19orf60Q96EN9 201 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 FEM1CQ96JP0 617 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 C8orf48Q96LL4 319 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 GPBP1L1Q9HC44 474 aaPredicted RBP5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 LIMD1Q9UGP4 676 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 ZMYM5Q9UJ78 669 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 FADS3Q9Y5Q0 445 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SMNDC1O75940 238 aaKnown RBP eCLIP5.62□□□□□ -1.518e-8■■■□□ 15.9
SYNCRIP-204ENST00000616122 IMPDH1P20839 514 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 NIPAL4Q0D2K0 466 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 BEND5Q7L4P6 421 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SFRP1Q8N474 314 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 TSSK3Q96PN8 268 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SORT1Q99523 831 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 C9orf16Q9BUW7 83 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 RNF208Q9H0X6 261 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 H3BMM5 538 aa5.62□□□□□ -1.51
SYNCRIP-204ENST00000616122 SYN3O14994 580 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms