RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 MPOP05164 745 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ACADMP11310 421 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 VARSP26640 1264 aaKnown RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 SLC26A2P50443 739 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ZIK1Q3SY52 487 aaPredicted RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF550Q7Z398 422 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF408Q9H9D4 720 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 FAM196BA6NMK8 535 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 M0R233 179 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 MRASO14807 208 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 BCKDKO14874 412 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 APOC3P02656 99 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 NOS2P35228 1153 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 HTR2BP41595 481 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 CDK16Q00536 496 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 FAM189A2Q15884 450 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ALG11Q2TAA5 492 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 NIF3L1Q9GZT8 377 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 POLR3FQ9H1D9 316 aaPredicted RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 BCL9LQ86UU0 1499 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 E9PI62 339 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 IFNA21P01568 189 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 FDFT1P37268 417 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ZSWIM2Q8NEG5 633 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 MED15Q96RN5 788 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 RHPN2P1A8MT19 583 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SLC1A2P43004 574 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TSPAN5P62079 268 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ZNF767PQ75MW2 155 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 DSG4Q86SJ6 1040 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 AFG1LQ8WV93 481 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TOP1MTQ969P6 601 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 RNF31Q96EP0 1072 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TBCBQ99426 244 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 DPAGT1Q9H3H5 408 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 C8orf33Q9H7E9 229 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 AHSPQ9NZD4 102 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ARMCX1Q9P291 453 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 DOCK10Q96BY6 2186 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 A8MVJ9 347 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 BNIP3LO60238 219 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 OR1I1O60431 355 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 MOCS2O96007 188 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 RAB3BP20337 219 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 VEGFCP49767 419 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 HERVK_113P62684 666 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ADAM15Q13444 863 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PCK2Q16822 640 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PTCHD4Q6ZW05 846 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 C15orf40Q8WUR7 153 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 AP5Z1O43299 807 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PPP5CP53041 499 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 CUL2Q13617 745 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 BRSK1Q8TDC3 778 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 HDAC7Q8WUI4 952 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 KCNN2Q9H2S1 579 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SLC35F4A4IF30 521 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TRAPPC3O43617 180 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ITGB1P05556 798 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TLE3Q04726 772 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ZFAND2BQ8WV99 257 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 OR6C65A6NJZ3 312 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ENSAO43768 121 aaKnown RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SLC44A5Q8NCS7 719 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TMEM161BQ8NDZ6 487 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 CORO2AQ92828 525 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 RPRD1AQ96P16 312 aaPredicted RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PACSIN3Q9UKS6 424 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 LCHNA4D1U4 455 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SLC16A4O15374 487 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 FADS2O95864 444 aaKnown RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ASLP04424 464 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PNPLA4P41247 253 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 CTBP2P56545 445 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 NR6A1Q15406 480 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SNAPC1Q16533 368 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 RNF220Q5VTB9 566 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ETFRF1Q6IPR1 90 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 POU5F2Q8N7G0 328 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 MARK4Q96L34 752 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 PPP3R2Q96LZ3 170 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 NUDT16L1Q9BRJ7 211 aaKnown RBP9.26□□□□□ -0.93
COL12A1-211ENST00000615798 DBNDD1Q9H9R9 158 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ABCB9Q9NP78 766 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TMEM260Q9NX78 707 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 TAF6LQ9Y6J9 622 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 AGAP5A6NIR3 686 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 MAP3K6O95382 1288 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 CERCAMQ5T4B2 595 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 ALG1LQ6GMV1 187 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 NEK7Q8TDX7 302 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 CDRT15Q96T59 188 aa9.26□□□□□ -0.93
COL12A1-211ENST00000615798 FRMPD4Q14CM0 1322 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms