RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ZNF184Q99676 751 aaPredicted RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 ZNF385DQ9H6B1 395 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 BPIFA1Q9NP55 256 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 CATSPERZQ9NTU4 200 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 NDE1Q9NXR1 346 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 CORO1CQ9ULV4 474 aaPredicted RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 ARIH1Q9Y4X5 557 aaPredicted RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 NPHS1O60500 1241 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 CRTAMO95727 393 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 TFEBP19484 476 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 IRS1P35568 1242 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 LMAN2Q12907 356 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 TAF1AQ15573 450 aaPredicted RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 LSM12Q3MHD2 195 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 TECRLQ5HYJ1 363 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 GPR158Q5T848 1215 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 IRGCQ6NXR0 463 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 UBE2Q1Q7Z7E8 422 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 DEFB107AQ8IZN7 70 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 MRPL43Q8N983 215 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 DCAF4L2Q8NA75 395 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 SP7Q8TDD2 431 aaPredicted RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 POF1BQ8WVV4 589 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 MRPL57Q9BQC6 102 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 C17orf80Q9BSJ5 609 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 CCDC28BQ9BUN5 200 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 ASAH2Q9NR71 780 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 ZDHHC2Q9UIJ5 367 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 INTS6Q9UL03 887 aaKnown RBP19.1■□□□□ 0.65
MMP28-204ENST00000615136 PPM1HQ9ULR3 514 aa19.1■□□□□ 0.65
MMP28-204ENST00000615136 A6NHS1 94 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 SNUPNO95149 360 aaKnown RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 BMPR1AP36894 532 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 KCNC1P48547 511 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 CLCN4P51793 760 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 STC1P52823 247 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 KLC1Q07866 573 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 CPSF7Q8N684 471 aaKnown RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 LENG8Q96PV6 779 aaPredicted RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 RAD9AQ99638 391 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 WDR55Q9H6Y2 383 aaPredicted RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 S100A14Q9HCY8 104 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 POLR3BQ9NW08 1133 aaPredicted RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 RIMKLBQ9ULI2 386 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 FNDC3AQ9Y2H6 1198 aaKnown RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 PCDHB9Q9Y5E1 797 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 IRAK3Q9Y616 596 aa19.09■□□□□ 0.65
MMP28-204ENST00000615136 RANBP2P49792 3224 aaKnown RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 MTCL1Q9Y4B5 1905 aaKnown RBP19.09■□□□□ 0.65
MMP28-204ENST00000615136 GOLGA8QA0A0J9YX86 632 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 LOC100653049A0A140TA62 436 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 GOLGA8OA6NCC3 632 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 GOLGA8NF8WBI6 632 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 TLL1O43897 1013 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 FZD6O60353 706 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 MOSPD3O75425 235 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 KRT34O76011 436 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 SYN1P17600 705 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 PIK3R1P27986 724 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 ADSLP30566 484 aaPredicted RBP19.08■□□□□ 0.65
MMP28-204ENST00000615136 SERPINB5P36952 375 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 EPHB1P54762 984 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 DNAJB13P59910 316 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 TBL3Q12788 808 aaKnown RBP19.08■□□□□ 0.65
MMP28-204ENST00000615136 PEX6Q13608 980 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 PPM1LQ5SGD2 360 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 FAM219BQ5XKK7 198 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 MRNIPQ6NTE8 343 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 ACAD11Q709F0 780 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 RPS27LQ71UM5 84 aaKnown RBP19.08■□□□□ 0.65
MMP28-204ENST00000615136 CAMK1DQ8IU85 385 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 CMTM8Q8IZV2 173 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 CPXM2Q8N436 756 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 GABPB2Q8TAK5 448 aaPredicted RBP19.08■□□□□ 0.65
MMP28-204ENST00000615136 SPPL3Q8TCT6 385 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 EID2BQ96D98 161 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 FKBPLQ9UIM3 349 aa19.08■□□□□ 0.65
MMP28-204ENST00000615136 HELZP42694 1942 aaKnown RBP19.08■□□□□ 0.64
MMP28-204ENST00000615136 GPR39O43194 453 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 PDE5AO76074 875 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 LTA4HP09960 611 aaKnown RBP19.08■□□□□ 0.64
MMP28-204ENST00000615136 FDXRP22570 491 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 CES1P23141 567 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 EPHA3P29320 983 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 CTSOP43234 321 aaPredicted RBP19.08■□□□□ 0.64
MMP28-204ENST00000615136 MTTPP55157 894 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 LAMB3Q13751 1172 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 CAMK1Q14012 370 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 CCNIQ14094 377 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 SLC5A9Q2M3M2 681 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 TYSND1Q2T9J0 566 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 PIWIL4Q7Z3Z4 852 aaKnown RBP19.08■□□□□ 0.64
MMP28-204ENST00000615136 PIANPQ8IYJ0 282 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 ELMOD1Q8N336 334 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 TTC30BQ8N4P2 665 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 EMILIN2Q9BXX0 1053 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 NUF2Q9BZD4 464 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 CYP4F12Q9HCS2 524 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 STK39Q9UEW8 545 aa19.08■□□□□ 0.64
MMP28-204ENST00000615136 CDYLQ9Y232 598 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms