RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ANKRD13AQ8IZ07 590 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 OR8H2Q8N162 312 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 CLIP4Q8N3C7 705 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 TERB1Q8NA31 727 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 B3GALNT2Q8NCR0 500 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 CALML6Q8TD86 181 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 MTMR10Q9NXD2 777 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 TRHDEQ9UKU6 1024 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 PABPN1LA6NDY0 278 aaKnown RBP11.76□□□□□ -0.53
CDH5-208ENST00000614547 SNPHO15079 494 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 AP1G1O43747 822 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 GSNP06396 782 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 THRBP10828 461 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SLC2A4P14672 509 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 MATN1P21941 496 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 FMO3P31513 532 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 RCVRNP35243 200 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 WNT3AP56704 352 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 VBP1P61758 197 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 MAPRE1Q15691 268 aaKnown RBP11.76□□□□□ -0.53
CDH5-208ENST00000614547 PPP4R4Q6NUP7 873 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 IGFN1Q86VF2 1251 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SLC22A16Q86VW1 577 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 ZDHHC17Q8IUH5 632 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SLC22A9Q8IVM8 553 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SLC15A3Q8IY34 581 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 LSMEM2Q8N112 164 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SMG8Q8ND04 991 aaKnown RBP11.76□□□□□ -0.53
CDH5-208ENST00000614547 TFAP2CQ92754 450 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDH5-208ENST00000614547 ULK4Q96C45 1275 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 MTFMTQ96DP5 389 aaKnown RBP11.76□□□□□ -0.53
CDH5-208ENST00000614547 RTP4Q96DX8 246 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SPATA17Q96L03 361 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 CDK15Q96Q40 435 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 GPR20Q99678 358 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 GBA3Q9H227 469 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 FZD8Q9H461 694 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SLC38A7Q9NVC3 462 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 TBCCD1Q9NVR7 557 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 KRBA1A5PL33 1030 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SH3BGRLO75368 114 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 CLPXO76031 633 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 BMP10O95393 424 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 APOA1P02647 267 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 ARHGDIAP52565 204 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 TNK2Q07912 1038 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 DMC1Q14565 340 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 CCDC85BQ15834 202 aaPredicted RBP11.76□□□□□ -0.53
CDH5-208ENST00000614547 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 STRADAQ7RTN6 431 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 LYSMD3Q7Z3D4 306 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 THAP5Q7Z6K1 395 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 NPWQ8N729 165 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 TBC1D15Q8TC07 691 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 LRRC58Q96CX6 371 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 DMRTB1Q96MA1 342 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 BIRC8Q96P09 236 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 BBS2Q9BXC9 721 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SPATC1LQ9H0A9 340 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 NDFIP2Q9NV92 336 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
CDH5-208ENST00000614547 KCTD3Q9Y597 815 aa11.76□□□□□ -0.53
CDH5-208ENST00000614547 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 CASTOR2A6NHX0 329 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 A8MV72 311 aaPredicted RBP11.75□□□□□ -0.53
CDH5-208ENST00000614547 RAD51BO15315 384 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 FAM20BO75063 409 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 BEST1O76090 585 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 NPR3P17342 541 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 S100A5P33763 92 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 DGKQP52824 942 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 HERC3Q15034 1050 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 SYT16Q17RD7 645 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 METTL6Q8TCB7 284 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 TBATAQ96M53 351 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 HGH1Q9BTY7 390 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 MUC3BQ9H195 1237 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 HPS4Q9NQG7 708 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 PSME2Q9UL46 239 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 A0A087X1B8 175 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 MOXD2PA6NHM9 499 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 TFECO14948 347 aaPredicted RBP11.75□□□□□ -0.53
CDH5-208ENST00000614547 RECQL5O94762 991 aaPredicted RBP11.75□□□□□ -0.53
CDH5-208ENST00000614547 PPIL2Q13356 520 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 DGUOKQ16854 277 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 CELF3Q5SZQ8 465 aaKnown RBP11.75□□□□□ -0.53
CDH5-208ENST00000614547 IL27RAQ6UWB1 636 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 ATG16L2Q8NAA4 619 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 TRPV3Q8NET8 790 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 TMBIM1Q969X1 311 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 C3orf30Q96M34 536 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 ANKRD60Q9BZ19 345 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 ASPSCR1Q9BZE9 553 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 LHPPQ9H008 270 aa11.75□□□□□ -0.53
CDH5-208ENST00000614547 MTRRQ9UBK8 725 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms