RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 ZNF217O75362 1048 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 DNTTP04053 509 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 HOXC4P09017 264 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 NDUFV2P19404 249 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CD9P21926 228 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LHCGRP22888 699 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CNTFP26441 200 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 ARNTP27540 789 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CSE1LP55060 971 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 TAS2R38P59533 333 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 XIAPP98170 497 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 UBXN2BQ14CS0 331 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CNGA3Q16281 694 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 GPR33Q49SQ1 333 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 TMEM259Q4ZIN3 620 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 DENND2CQ68D51 928 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LIPIQ6XZB0 460 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LYSMD3Q7Z3D4 306 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 SPATA21Q7Z572 469 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 TMPRSS6Q8IU80 811 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 MMAAQ8IVH4 418 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 DENND6BQ8NEG7 585 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 SNRNP27Q8WVK2 155 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 ULK4Q96C45 1275 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 SIPA1Q96FS4 1042 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LENG8Q96PV6 779 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 VPS35Q96QK1 796 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 UHRF1Q96T88 793 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CYTH2Q99418 400 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 POLR3BQ9NW08 1133 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LGALS13Q9UHV8 139 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 NDRG2Q9UN36 371 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 NCKAP1Q9Y2A7 1128 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 VPS9D1Q9Y2B5 631 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 SIT1Q9Y3P8 196 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 PKP3Q9Y446 797 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 MTF2Q9Y483 593 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 C1orf232A0A0U1RR37 186 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 TCRBV9S1A1TA0A576 114 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 GAPDHSO14556 408 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 IL1BP01584 269 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 EZRP15311 586 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 GM2AP17900 193 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 XPAP23025 273 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 NMBRP28336 390 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 FOXN2P32314 431 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 SPAM1P38567 509 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 SPINT3P49223 89 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LIG3P49916 1009 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 ADARP55265 1226 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 PTSQ03393 145 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 DNAJC3Q13217 504 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 POU6F1Q14863 301 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 KYNUQ16719 465 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 AARS2Q5JTZ9 985 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 RNF187Q5TA31 235 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 FBXW10Q5XX13 1052 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 LRRC66Q68CR7 880 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 FBXL19Q6PCT2 694 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CERS6Q6ZMG9 384 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 Q6ZS52 159 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CCDC25Q86WR0 208 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 TRAM1L1Q8N609 369 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 ZNF366Q8N895 744 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 C2CD4AQ8NCU7 369 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 FAM174AQ8TBP5 190 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 MIPOL1Q8TD10 442 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 BLOC1S5Q8TDH9 187 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 ZFAND2BQ8WV99 257 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 HEXDCQ8WVB3 486 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 ZNF669Q96BR6 464 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 EID2BQ96D98 161 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 DTNBP1Q96EV8 351 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 DTD2Q96FN9 168 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CDKN2AIPNLQ96HQ2 116 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 C9orf72Q96LT7 481 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 FCRL3Q96P31 734 aaPredicted RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CCDC77Q9BR77 488 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 C1QTNF2Q9BXJ5 285 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 GPR63Q9BZJ6 419 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 FOXQ1Q9C009 403 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 MKRN2Q9H000 416 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 CHRAC1Q9NRG0 131 aa6.23□□□□□ -1.41
CBWD3-210ENST00000614398 INTS10Q9NVR2 710 aaKnown RBP6.23□□□□□ -1.41
CBWD3-210ENST00000614398 IGLV3-16A0A075B6K0 115 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 TCRBV21S2A2A0A5A6 115 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 ANTXRLA6NF34 631 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 TMEM221A6NGB7 291 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 K7ESF4 209 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 M0R296 226 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 STX7O15400 261 aaKnown RBP6.22□□□□□ -1.41
CBWD3-210ENST00000614398 BANF1O75531 89 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 TPH1P17752 444 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 RPS3P23396 243 aaKnown RBP eCLIP6.22□□□□□ -1.41
CBWD3-210ENST00000614398 SERPINB9P50453 376 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 ADPRHP54922 357 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 CACNG1Q06432 222 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 ARHGEF7Q14155 803 aa6.22□□□□□ -1.41
CBWD3-210ENST00000614398 ITIH4Q14624 930 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms