RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RNASEH2AO75792 299 aaKnown RBP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 APLP1P51693 650 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 STC1P52823 247 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 PLD1Q13393 1074 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 TLR1Q15399 786 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 RETREG3Q86VR2 466 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 NUDT8Q8WV74 236 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 AUTS2Q8WXX7 1259 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 C19orf60Q96EN9 201 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 SLC22A12Q96S37 553 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 SERPINI1Q99574 410 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 MRPL1Q9BYD6 325 aaKnown RBP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 VCXQ9H320 206 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 FNIP2Q9P278 1114 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 UBA2Q9UBT2 640 aaPredicted RBP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 PSMD13Q9UNM6 376 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 ARVCFO00192 962 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 NDST3O95803 873 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 UQCRBP14927 111 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 HLA-DPA1P20036 260 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 CES1P23141 567 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 PAX3P23760 479 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 OXCT1P55809 520 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 HERVK_113P63132 956 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 SEMG2Q02383 582 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 FOLH1Q04609 750 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 LRP8Q14114 963 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 CYTH1Q15438 398 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 THEMIS2Q5TEJ8 643 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 UGT3A1Q6NUS8 523 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 SIDT2Q8NBJ9 832 aaKnown RBP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 HBEGFQ99075 208 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 AARSD1Q9BTE6 412 aaKnown RBP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 ERVK-6Q9BXR3 956 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 EML4Q9HC35 981 aaKnown RBP14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 RIMS3Q9UJD0 308 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 DNMT3LQ9UJW3 386 aa14.05□□□□□ -0.16
PCDHGA3-202ENST00000612467 ZNF840PA6NDX5 716 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 SMIM24O75264 130 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 SRP72O76094 671 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 MZF1P28698 734 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 EEF1DP29692 281 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 CA5AP35218 305 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 MAPKAPK2P49137 400 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 YBEYP58557 167 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 ACVR1Q04771 509 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 CAPRIN1Q14444 709 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 KIF19Q2TAC6 998 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 C18orf21Q32NC0 220 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 ATXN7L2Q5T6C5 722 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 RNF219Q5W0B1 726 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 MRNIPQ6NTE8 343 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 ATOH8Q96SQ7 321 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 MGME1Q9BQP7 344 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 CHD5Q8TDI0 1954 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 K7ERQ8 282 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 NR5A2O00482 541 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 CLASP2O75122 1294 aaKnown RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 STC2O76061 302 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 RHOCP08134 193 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 CTPS1P17812 591 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 DNAJB1P25685 340 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 GKP32189 559 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 ZNF140P52738 457 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 CDKL1Q00532 357 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 RING1Q06587 406 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 MED21Q13503 144 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 PTPRNQ16849 979 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 VPS26BQ4G0F5 336 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 OGFRL1Q5TC84 451 aaPredicted RBP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 MUC3BQ9H195 1237 aa14.04□□□□□ -0.16
PCDHGA3-202ENST00000612467 A0A1B0GTW7 788 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 MOXD2PA6NHM9 499 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 A8MX80 341 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 MRASO14807 208 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 INSIG1O15503 277 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 ECI2O75521 394 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 CD160O95971 181 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SPATA31D3P0C874 917 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 HK2P52789 917 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 ARF5P84085 180 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 TRAF2Q12933 501 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 HERC3Q15034 1050 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 NRF1Q16656 503 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 C6orf52Q5T4I8 152 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SPATA31D4Q6ZUB0 917 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 WFDC5Q8TCV5 224 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 TWIST2Q8WVJ9 160 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 LPGAT1Q92604 370 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SPATA17Q96L03 361 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 LRGUKQ96M69 825 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 CDK15Q96Q40 435 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 ACOX2Q99424 681 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 SCUBE2Q9NQ36 999 aa14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 AGO1Q9UL18 857 aaKnown RBP14.03□□□□□ -0.16
PCDHGA3-202ENST00000612467 FCF1Q9Y324 198 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms