RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ACADVLP49748 655 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 RING1Q06587 406 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 BNIP2Q12982 314 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CAPRIN1Q14444 709 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 LRRC23Q53EV4 343 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 OTUD3Q5T2D3 398 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 FAM9CQ8IZT9 166 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SCML4Q8N228 414 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 DIS3LQ8TF46 1054 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 TWIST2Q8WVJ9 160 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 DPY30Q9C005 99 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNX13-213ENST00000611725 BLOC1S6Q9UL45 172 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SNX5Q9Y5X3 404 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 MTMR11A4FU01 709 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 BBIP1A8MTZ0 92 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 I6L893 689 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 GABRB3P28472 473 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SERPINA4P29622 427 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CORO1AP31146 461 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 PHEXP78562 749 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 DLG1Q12959 904 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SERINC3Q13530 473 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 GTF2H3Q13889 308 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 KCTD11Q693B1 232 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 TXNDC11Q6PKC3 985 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PRSS55Q6UWB4 352 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 ANGPTL8Q6UXH0 198 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ZFRQ96KR1 1074 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 PSKH2Q96QS6 385 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CIB1Q99828 191 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 HOPXQ9BPY8 73 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ARNT2Q9HBZ2 717 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PLK2Q9NYY3 685 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 OPTCQ9UBM4 332 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 MYRFQ9Y2G1 1151 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 COMMD3-BMI1R4GMX3 469 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 C1orf232A0A0U1RR37 186 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 E7ENX8 843 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 LINC00032P0C843 101 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 GNAZP19086 355 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ZNF789Q5FWF6 425 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PIK3R6Q5UE93 754 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 LINGO4Q6UY18 593 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 NAPRTQ6XQN6 538 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 LRRC43Q8N309 656 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 OR6K2Q8NGY2 324 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ZNF483Q8TF39 744 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 PEX13Q92968 403 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ASB9Q96DX5 294 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 LINGO1Q96FE5 620 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 COPS8Q99627 209 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 GPR62Q9BZJ7 368 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ARHGAP39Q9C0H5 1083 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CCDC90BQ9GZT6 254 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ADNPQ9H2P0 1102 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PLAC1Q9HBJ0 212 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 TMEM248Q9NWD8 314 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SRRDQ9UH36 339 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 GJD2Q9UKL4 321 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 C16orf96A6NNT2 1141 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 F8W810 466 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 INSIG1O15503 277 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 MGEA5O60502 916 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PRAMEF11O60813 436 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 C1QAP02745 245 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 EPB42P16452 691 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ZNF37AP17032 561 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 CKMT2P17540 419 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 DGKAP23743 735 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 HSPA14Q0VDF9 509 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CRY1Q16526 586 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PGM2L1Q6PCE3 622 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 CPSF7Q8N684 471 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 VPS37AQ8NEZ2 397 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 HBEGFQ99075 208 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ASPSCR1Q9BZE9 553 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PCDHAC1Q9H158 963 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 TFB2MQ9H5Q4 396 aaKnown RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 EGFL7Q9UHF1 273 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ANAPC2Q9UJX6 822 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PCDHGB4Q9UN71 923 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SQORQ9Y6N5 450 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 F5P12259 2224 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 MYH7BA7E2Y1 1941 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 EVPLLA8MZ36 301 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 PIP5K1BO14986 540 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 HERVK_113P63132 956 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ADGRF1Q5T601 910 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ARMC3Q5W041 872 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 SAPCD2Q86UD0 394 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 STK32CQ86UX6 486 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 RASAL3Q86YV0 1011 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 DHRSXQ8N5I4 330 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 VPS50Q96JG6 964 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 TUBGCP5Q96RT8 1024 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 KCTD14Q9BQ13 255 aaPredicted RBP6.36□□□□□ -1.39
SNX13-213ENST00000611725 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
SNX13-213ENST00000611725 ERVK-6Q9BXR3 956 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms