RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 RUVBL2Q9Y230 463 aaKnown RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 C5orf42Q9H799 3197 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 A8MX80 341 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 CTSLP07711 333 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 PTPN5P54829 565 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 ITPRIPL2Q3MIP1 535 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 NAIF1Q69YI7 327 aaPredicted RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 FOXR1Q6PIV2 292 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 CENPLQ8N0S6 344 aaPredicted RBP21.52■■□□□ 1.04
USP6NL-204ENST00000606752 ZNF366Q8N895 744 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 RAB3IL1Q8TBN0 382 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 UCMAQ8WVF2 138 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 KCTD4Q8WVF5 259 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 EPS15L1Q9UBC2 864 aa21.52■■□□□ 1.04
USP6NL-204ENST00000606752 TSPAN11A1L157 253 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 SNX3O60493 162 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 SRP72O76094 671 aaKnown RBP21.51■■□□□ 1.03
USP6NL-204ENST00000606752 KLHL2O95198 593 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 APOA4P06727 396 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 CPA3P15088 417 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 IGFBP4P22692 258 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 CDKN2DP55273 166 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 PTSQ03393 145 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 HNRNPA1L2Q32P51 320 aaKnown RBP21.51■■□□□ 1.03
USP6NL-204ENST00000606752 ZNF805Q5CZA5 627 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 ATG16L1Q676U5 607 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 LRRC66Q68CR7 880 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 TBC1D1Q86TI0 1168 aaPredicted RBP21.51■■□□□ 1.03
USP6NL-204ENST00000606752 CACNA2D3Q8IZS8 1091 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.51■■□□□ 1.038e-8■■■■■ 44.9
USP6NL-204ENST00000606752 AARSD1Q9BTE6 412 aaKnown RBP21.51■■□□□ 1.03
USP6NL-204ENST00000606752 FAM96AQ9H5X1 160 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 IL26Q9NPH9 171 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 COPG2Q9UBF2 871 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 DKK3Q9UBP4 350 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 STARD13Q9Y3M8 1113 aa21.51■■□□□ 1.03
USP6NL-204ENST00000606752 EDDM13A0A1B0GTR0 161 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 UBA6A0AVT1 1052 aaPredicted RBP21.5■■□□□ 1.03
USP6NL-204ENST00000606752 ARNTLO00327 626 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 EBAG9O00559 213 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 BPIP17213 487 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 ALDH3A1P30838 453 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 DMTNQ08495 405 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 ZNF234Q14588 700 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 TSNAXIP1Q2TAA8 658 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 CERS6Q6ZMG9 384 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 TAS2R42Q7RTR8 314 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 SFTPA1Q8IWL2 248 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 NXNL1Q96CM4 212 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 GPAMQ9HCL2 828 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 B4GALT6Q9UBX8 382 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 TNRC18O15417 2968 aaPredicted RBP21.5■■□□□ 1.03
USP6NL-204ENST00000606752 GAPDHSO14556 408 aaPredicted RBP21.5■■□□□ 1.03
USP6NL-204ENST00000606752 DNAJC6O75061 913 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 KAT7O95251 611 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 PRAMEF1O95521 474 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 FDXRP22570 491 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 NFKBIAP25963 317 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 SLC26A3P40879 764 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 SEMG2Q02383 582 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 PCLAFQ15004 111 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 CHI3L2Q15782 390 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 FAM151BQ6UXP7 276 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 SUSD6Q92537 303 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 CHFRQ96EP1 664 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 GPR78Q96P69 363 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 CCDC68Q9H2F9 335 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 TMEM245Q9H330 911 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 NUMBLQ9Y6R0 609 aa21.5■■□□□ 1.03
USP6NL-204ENST00000606752 WISP3O95389 354 aaPredicted RBP21.49■■□□□ 1.03
USP6NL-204ENST00000606752 CHRM1P11229 460 aaPredicted RBP21.49■■□□□ 1.03
USP6NL-204ENST00000606752 CYP2A6P11509 494 aaPredicted RBP21.49■■□□□ 1.03
USP6NL-204ENST00000606752 TIMP2P16035 220 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 KCNA4P22459 653 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 LHCGRP22888 699 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 FMO4P31512 558 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 PPARGP37231 505 aaPredicted RBP21.49■■□□□ 1.03
USP6NL-204ENST00000606752 SPAM1P38567 509 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 GRIA2P42262 883 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 PTGER3P43115 390 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 DLG1Q12959 904 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 FAM83EQ2M2I3 478 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 C9orf64Q5T6V5 341 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 NUDT18Q6ZVK8 323 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 OTOAQ7RTW8 1153 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 SNX20Q7Z614 316 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 STK40Q8N2I9 435 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 CCDC197Q8NCU1 140 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 PBXIP1Q96AQ6 731 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 UBXN10Q96LJ8 280 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 TSSK1BQ9BXA7 367 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 POPDC3Q9HBV1 291 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 MID2Q9UJV3 735 aa21.49■■□□□ 1.03
USP6NL-204ENST00000606752 USP15Q9Y4E8 981 aaPredicted RBP21.49■■□□□ 1.03
USP6NL-204ENST00000606752 SZT2Q5T011 3432 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 GLYATL1P3A0A0U1RQE8 302 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 A0A1W2PPC1 479 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 UPK3BL1B0FP48 263 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 UPK3BL2E5RIL1 263 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 PRNPP04156 253 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms