RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 NR1D2Q14995 579 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 NFKBIBQ15653 356 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 MANEAQ5SRI9 462 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 CCDC122Q5T0U0 273 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 LRRC66Q68CR7 880 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.24■■□□□ 1.47
SNX5-219ENST00000606602 SYN2Q92777 582 aaPredicted RBP24.24■■□□□ 1.47
SNX5-219ENST00000606602 AP2M1Q96CW1 435 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 SMIM14Q96QK8 99 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 POLR1EQ9GZS1 481 aaKnown RBP24.24■■□□□ 1.47
SNX5-219ENST00000606602 CDH19Q9H159 772 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 ABCG8Q9H221 673 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 TMEM98Q9Y2Y6 226 aa24.24■■□□□ 1.47
SNX5-219ENST00000606602 A0A1W2PQJ5 194 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 MYO1FO00160 1098 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 MFSD11O43934 449 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 FZD6O60353 706 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 SERPING1P05155 500 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 CYP1A2P05177 515 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 CCL4P13236 92 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 CD1CP29017 333 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 ACTR1BP42025 376 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 EPHB1P54762 984 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 ACTR1AP61163 376 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 CLPPQ16740 277 aaPredicted RBP24.23■■□□□ 1.47
SNX5-219ENST00000606602 HADHQ16836 314 aaKnown RBP24.23■■□□□ 1.47
SNX5-219ENST00000606602 TMEM164Q5U3C3 297 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 ADAMTSL4Q6UY14 1074 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 ZNF574Q6ZN55 896 aaPredicted RBP24.23■■□□□ 1.47
SNX5-219ENST00000606602 VASH2Q86V25 355 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 NAGSQ8N159 534 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 RCBTB1Q8NDN9 531 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 CPLX3Q8WVH0 158 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 SCAMP4Q969E2 229 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 OR2M4Q96R27 311 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 PLEKHM1Q9Y4G2 1056 aa24.23■■□□□ 1.47
SNX5-219ENST00000606602 SETXQ7Z333 2677 aaKnown RBP24.22■■□□□ 1.47
SNX5-219ENST00000606602 A0A087X0T9 212 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 SOD1P00441 154 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 FAM228BP0C875 321 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 GARSP41250 739 aaKnown RBP24.22■■□□□ 1.47
SNX5-219ENST00000606602 GPR3P46089 330 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 PTSQ03393 145 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 GALNT2Q10471 571 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 MARK2Q7KZI7 788 aaKnown RBP24.22■■□□□ 1.47
SNX5-219ENST00000606602 TRIM74Q86UV6 250 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 TTLL3Q9Y4R7 772 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 UNC13CQ8NB66 2214 aa24.22■■□□□ 1.47
SNX5-219ENST00000606602 IGHV5-10-1A0A0J9YXX1 117 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 A0A0J9YYE9 177 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 PPM1DO15297 605 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 TRBC1P01850 177 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 GJC1P36383 396 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 TPM4P67936 248 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 FANCCQ00597 558 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 DSC2Q02487 901 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 NKAIN2Q5VXU1 208 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 TIGD7Q6NT04 549 aaPredicted RBP24.21■■□□□ 1.47
SNX5-219ENST00000606602 EXD3Q8N9H8 876 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 FAM71BQ8TC56 605 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 SCARF2Q96GP6 870 aaPredicted RBP24.21■■□□□ 1.47
SNX5-219ENST00000606602 CCDC74BQ96LY2 380 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 ARHGAP9Q9BRR9 750 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 RBM22Q9NW64 420 aaKnown RBP eCLIP24.21■■□□□ 1.471e-87■□□□□ 11
SNX5-219ENST00000606602 CHKBQ9Y259 395 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 TENM4Q6N022 2769 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 PIEZO2Q9H5I5 2752 aa24.21■■□□□ 1.47
SNX5-219ENST00000606602 HGSO14964 777 aaPredicted RBP24.2■■□□□ 1.46
SNX5-219ENST00000606602 MATN3O15232 486 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 MAP3K6O95382 1288 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 ZNF30P17039 623 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 CD82P27701 267 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 ARSEP51690 589 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 ZBED6P86452 979 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 DPYSL3Q14195 570 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 PAFAH1B3Q15102 231 aaKnown RBP24.2■■□□□ 1.46
SNX5-219ENST00000606602 LINC00303Q3SY05 128 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 ATP13A4Q4VNC1 1196 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 NCBP2-AS2Q69YL0 99 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 ALKBH5Q6P6C2 394 aaKnown RBP24.2■■□□□ 1.46
SNX5-219ENST00000606602 ZNF765Q7L2R6 523 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 DTX1Q86Y01 620 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 KCTD6Q8NC69 237 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 MAML1Q92585 1016 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 EXTL1Q92935 676 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 AGAP2Q99490 1192 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 FUCA2Q9BTY2 467 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 B3GNT4Q9C0J1 378 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 HAUS2Q9NVX0 235 aa24.2■■□□□ 1.46
SNX5-219ENST00000606602 INPP4BO15327 924 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 PYGLP06737 847 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 CES1P23141 567 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 PBX1P40424 430 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 STC1P52823 247 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 LIMK2P53671 638 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 UBASH3AP57075 661 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 IHHQ14623 411 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 IFI16Q16666 785 aaKnown RBP24.19■■□□□ 1.46
SNX5-219ENST00000606602 PYCR3Q53H96 274 aa24.19■■□□□ 1.46
SNX5-219ENST00000606602 NLRP8Q86W28 1048 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms