RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 SLC39A1Q9NY26 324 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 KCNK4Q9NYG8 393 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 TUBD1Q9UJT1 453 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 ST14Q9Y5Y6 855 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 B3GALT1Q9Y5Z6 326 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 UBR5O95071 2799 aaPredicted RBP17.13■□□□□ 0.33
SMG9-210ENST00000600097 NPIPB15A6NHN6 443 aaPredicted RBP17.12■□□□□ 0.33
SMG9-210ENST00000600097 B4E171 279 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 CAPN5O15484 640 aaPredicted RBP17.12■□□□□ 0.33
SMG9-210ENST00000600097 PGLSO95336 258 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 GZMAP12544 262 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 PCK1P35558 622 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 TSPAN7P41732 249 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 GPR1P46091 355 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 POLD2P49005 469 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 RAB15P59190 212 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 TRAF2Q12933 501 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 DPYSL2Q16555 572 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 DCAF12Q5T6F0 453 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 ARMC12Q5T9G4 340 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 NKAIN2Q5VXU1 208 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 TMEM71Q6P5X7 295 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 TECPR1Q7Z6L1 1165 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 CACNA2D3Q8IZS8 1091 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 NDUFAF2Q8N183 169 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 PGBD5Q8N414 524 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 PTCD2Q8WV60 388 aaKnown RBP17.12■□□□□ 0.33
SMG9-210ENST00000600097 CATSPER2Q96P56 530 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 PPIL1Q9Y3C6 166 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 SCINQ9Y6U3 715 aa17.12■□□□□ 0.33
SMG9-210ENST00000600097 SDK2Q58EX2 2172 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 MAFKO60675 156 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 PYGLP06737 847 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 LIFP15018 202 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 PTMSP20962 102 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 CSF2RBP32927 897 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 MMP13P45452 471 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 FASLGP48023 281 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 CDH6P55285 790 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 TLE1Q04724 770 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 LRP8Q14114 963 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 BOLA3Q53S33 107 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 MARC1Q5VT66 337 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 DOK6Q6PKX4 331 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 ADAMTSL4Q6UY14 1074 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 APTXQ7Z2E3 356 aaKnown RBP17.11■□□□□ 0.33
SMG9-210ENST00000600097 NLRP8Q86W28 1048 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 FAM129CQ86XR2 697 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 ZNF564Q8TBZ8 553 aaPredicted RBP17.11■□□□□ 0.33
SMG9-210ENST00000600097 PMEPA1Q969W9 287 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 AP2M1Q96CW1 435 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 AHCYL2Q96HN2 611 aaKnown RBP17.11■□□□□ 0.33
SMG9-210ENST00000600097 TEFMQ96QE5 360 aaKnown RBP17.11■□□□□ 0.33
SMG9-210ENST00000600097 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
SMG9-210ENST00000600097 PDP2Q9P2J9 529 aa17.11■□□□□ 0.33
SMG9-210ENST00000600097 CNOT8Q9UFF9 292 aaKnown RBP17.11■□□□□ 0.33
SMG9-210ENST00000600097 ZNF891A8MT65 544 aaPredicted RBP17.1■□□□□ 0.33
SMG9-210ENST00000600097 RAD1O60671 282 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 FTLP02792 175 aaPredicted RBP17.1■□□□□ 0.33
SMG9-210ENST00000600097 AMPD1P23109 780 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 SERPINB6P35237 376 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 CCR10P46092 362 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 POLE2P56282 527 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 KCNAB2Q13303 367 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 PYCR3Q53H96 274 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 ZNF765Q7L2R6 523 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 POLNQ7Z5Q5 900 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 TSPAN33Q86UF1 283 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 OR10G6Q8NH81 332 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 TRIM11Q96F44 468 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 PTPN13Q12923 2485 aa17.1■□□□□ 0.33
SMG9-210ENST00000600097 EFCAB7A8K855 629 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 DUX1O43812 170 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 SOD1P00441 154 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 ZNF30P17039 623 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 MPSTP25325 297 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 MAN1A1P33908 653 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 PPM1FP49593 454 aaPredicted RBP17.09■□□□□ 0.33
SMG9-210ENST00000600097 MAXP61244 160 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 STX1AQ16623 288 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 COLEC12Q5KU26 742 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 LRRC66Q68CR7 880 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 GALNT13Q8IUC8 556 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 NRSN1Q8IZ57 195 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 SFRP1Q8N474 314 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 PIH1D2Q8WWB5 315 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 KIAA1143Q96AT1 154 aaPredicted RBP17.09■□□□□ 0.33
SMG9-210ENST00000600097 ZNF653Q96CK0 615 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 SLC45A3Q96JT2 553 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 CSPG4P5Q96PW8 444 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 SLC38A3Q99624 504 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 EFHD1Q9BUP0 239 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 ABCG8Q9H221 673 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 ETNK2Q9NVF9 386 aa17.09■□□□□ 0.33
SMG9-210ENST00000600097 OCIAD1Q9NX40 245 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms