RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 KIAA1024LP59773 190 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 MORF4L2Q15014 288 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 PTPRRQ15256 657 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 SKIDA1Q1XH10 827 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 PRR23CQ6ZRP0 262 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CTAGE6Q86UF2 777 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 CTAGE4Q8IX94 777 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 TRAM1L1Q8N609 369 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 NAT8LQ8N9F0 302 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 STYXQ8WUJ0 223 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 SNF8Q96H20 258 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 ERP44Q9BS26 406 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 TEX101Q9BY14 249 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 RAB17Q9H0T7 212 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 FZD3Q9NPG1 666 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 PHPT1Q9NRX4 125 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 TRPM6Q9BX84 2022 aa16.5■□□□□ 0.23
SHKBP1-219ENST00000599575 TNRC6BQ9UPQ9 1833 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 A0A1B0GVT2 93 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 MROH6A6NGR9 719 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 H7C0S8 307 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 TNFRSF10CO14798 259 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 AURKAO14965 403 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 LDB2O43679 373 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 WNT1P04628 370 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 ZNF883P0CG24 379 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 BPIP17213 487 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 IVDP26440 423 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 SPAM1P38567 509 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 GPR1P46091 355 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 ARRB1P49407 418 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 CLDN2P57739 230 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 IRX4P78413 519 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 GRIK2Q13002 908 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 OLIG2Q13516 323 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 ITGA9Q13797 1035 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 ZNF423Q2M1K9 1284 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 PCID2Q5JVF3 399 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 RNASEH2BQ5TBB1 312 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 RIF1Q5UIP0 2472 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 RAET1GQ6H3X3 334 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 MACC1Q6ZN28 852 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 PTAR1Q7Z6K3 402 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 MMGT1Q8N4V1 131 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 OR13H1Q8NG92 308 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 VPS35Q96QK1 796 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 APOOQ9BUR5 198 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 RIOK2Q9BVS4 552 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 UTP11Q9Y3A2 253 aaKnown RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 SLCO1B1Q9Y6L6 691 aa16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 EP300Q09472 2414 aaPredicted RBP16.49■□□□□ 0.23
SHKBP1-219ENST00000599575 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 EFCAB8A8MWE9 144 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 PATE3B3GLJ2 98 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 GPR89AB7ZAQ6 455 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 H0Y8X5 98 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 PCCBP05166 539 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 GPR89BP0CG08 455 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 MYCLP1P12525 358 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 ENGP17813 658 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 RXRGP48443 463 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 BLKP51451 505 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 ZNF140P52738 457 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 C2orf54Q08AI8 447 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 SLC14A1Q13336 389 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 POU6F1Q14863 301 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 NFATC4Q14934 902 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 KIF19Q2TAC6 998 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 PARGQ86W56 976 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 GPR26Q8NDV2 337 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 PPHLN1Q8NEY8 458 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 SCAMP4Q969E2 229 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 TBATAQ96M53 351 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 ELF4Q99607 663 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 MYOCQ99972 504 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 MRM3Q9HC36 420 aaKnown RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 IL26Q9NPH9 171 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 NLE1Q9NVX2 485 aaPredicted RBP16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 WHRNQ9P202 907 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 ARL5AQ9Y689 179 aa16.48■□□□□ 0.23
SHKBP1-219ENST00000599575 CEP192Q8TEP8 1941 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 USP34Q70CQ2 3546 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 GLYATL1P3A0A0U1RQE8 302 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SDR42E2A6NKP2 422 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 SEC31AO94979 1220 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 TPH1P17752 444 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 DEKP35659 375 aaKnown RBP16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 GRIA1P42261 906 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 MAGEA3P43357 314 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 LIMK1P53667 647 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 ARHGAP8P85298 464 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 CAV1Q03135 178 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 CALCOCO2Q13137 446 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 CBLBQ13191 982 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 PDE1CQ14123 709 aaPredicted RBP16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 GPR33Q49SQ1 333 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
SHKBP1-219ENST00000599575 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms