RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CTSOP43234 321 aaPredicted RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 COPAP53621 1224 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 CDH13P55290 713 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 PDAP1Q13442 181 aaKnown RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 PTPRNQ16849 979 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 FBXO48Q5FWF7 155 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 WLSQ5T9L3 541 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 PLPP4Q5VZY2 271 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 LYSMD3Q7Z3D4 306 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 NECAB2Q7Z6G3 386 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 SCUBE1Q8IWY4 988 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 ULK2Q8IYT8 1036 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 CMTM8Q8IZV2 173 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 PIH1D2Q8WWB5 315 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 CLP1Q92989 425 aaKnown RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 CNDP1Q96KN2 507 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 CATSPER2Q96P56 530 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 C1orf21Q9H246 121 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 MMADHCQ9H3L0 296 aaPredicted RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 INTS10Q9NVR2 710 aaKnown RBP14.43□□□□□ -0.1
VRK3-217ENST00000599538 SLC7A8Q9UHI5 535 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 MAFFQ9ULX9 164 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 C5orf42Q9H799 3197 aa14.43□□□□□ -0.1
VRK3-217ENST00000599538 A0A088AWK7 358 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 CCDC189A1A4V9 331 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 SDHDO14521 159 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 STX7O15400 261 aaKnown RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 MAGEC1O60732 1142 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 NIPSNAP2O75323 286 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 NDUFS3O75489 264 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 KRT36O76013 467 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 SRP72O76094 671 aaKnown RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 SLC26A3P40879 764 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 STK19P49842 368 aaPredicted RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 RAP1GDS1P52306 607 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 EPHB1P54762 984 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 C1QTNF8P60827 252 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 XIAPP98170 497 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 ASPHQ12797 758 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 PREPLQ4J6C6 727 aaPredicted RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 UNC50Q53HI1 259 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 ZRANB3Q5FWF4 1079 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 ZNF678Q5SXM1 525 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 METTL21CQ5VZV1 264 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 NXNQ6DKJ4 435 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 CUZD1Q86UP6 607 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 GPR65Q8IYL9 337 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 EFCAB3Q8N7B9 438 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 VOPP1Q96AW1 172 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 GPR21Q99679 349 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 TACO1Q9BSH4 297 aaKnown RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 EBF2Q9HAK2 575 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 IL17CQ9P0M4 197 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 SSX2IPQ9Y2D8 614 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 TRAV19A0A0A6YYK7 116 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 IQCF5A8MTL0 148 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 SUPT7LO94864 414 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 ADH1AP07327 375 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 COX4I1P13073 169 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 IMPDH1P20839 514 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 SEMG2Q02383 582 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 BTKQ06187 659 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 DGKKQ5KSL6 1271 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 CTSL3PQ5NE16 218 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 CLEC6AQ6EIG7 209 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 BADQ92934 168 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 ATOH8Q96SQ7 321 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 C2orf49Q9BVC5 232 aaPredicted RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 ZNF385DQ9H6B1 395 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 VTI1BQ9UEU0 232 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 CORO1CQ9ULV4 474 aaPredicted RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 RPL26L1Q9UNX3 145 aaKnown RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 CDYLQ9Y232 598 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 ZNF711Q9Y462 761 aa14.42□□□□□ -0.1
VRK3-217ENST00000599538 RANBP2P49792 3224 aaKnown RBP14.42□□□□□ -0.1
VRK3-217ENST00000599538 A8MX80 341 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 PGLSO95336 258 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 FGBP02675 491 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 GNAZP19086 355 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 PIK3R1P27986 724 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CREMQ03060 361 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 PLEKHG6Q3KR16 790 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CYHR1Q6ZMK1 362 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ZSWIM9Q86XI8 627 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CPXM2Q8N436 756 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 PTGR2Q8N8N7 351 aaPredicted RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 ENDOVQ8N8Q3 282 aaKnown RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 GIMAP7Q8NHV1 300 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CCDC126Q96EE4 140 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 MYO19Q96H55 970 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 MAELQ96JY0 434 aaKnown RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 NSUN5Q96P11 429 aaKnown RBP14.41□□□□□ -0.1
VRK3-217ENST00000599538 PANX3Q96QZ0 392 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 SLCO1B7G3V0H7 640 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CDC7O00311 574 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 ITGAXP20702 1163 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 HLA-FP30511 346 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 CUL3Q13618 768 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 PPP1R3AQ16821 1122 aa14.41□□□□□ -0.1
VRK3-217ENST00000599538 PFKFB4Q16877 469 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms