RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 PAGE1O75459 146 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 SMPD1P17405 629 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 BDNFP23560 247 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 BHLHA9Q7RTU4 235 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 NSUN5Q96P11 429 aaKnown RBP17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 DOK1Q99704 481 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 C8orf4Q9NR00 106 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 MPP6Q9NZW5 540 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 SH3BP1Q9Y3L3 701 aa17.36■□□□□ 0.37
ARHGEF1-213ENST00000595897 J3QRK9 145 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 UBXN8O00124 270 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 ALBP02768 609 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 CCNA2P20248 432 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 APLP1P51693 650 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 DIO3P55073 304 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 KCNK10P57789 538 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 SLC14A2Q15849 920 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 UBXN11Q5T124 520 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 COLGALT2Q8IYK4 626 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 DCP1BQ8IZD4 617 aaKnown RBP17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 OR13J1Q8NGT2 312 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 SH3RF2Q8TEC5 729 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 FBXL8Q96CD0 374 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 FCRL2Q96LA5 508 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 ING2Q9H160 280 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 PFDN4Q9NQP4 134 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 IFT80Q9P2H3 777 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 PTGESO14684 152 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 MYL3P08590 195 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 SMIM10L2AP0DMW4 78 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 SMIM10L2BP0DMW5 78 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 CD86P42081 329 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 LIPEQ05469 1076 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 TGFBIQ15582 683 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 ZIK1Q3SY52 487 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 CCNYL2Q5T2Q4 361 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 DCDC5Q6ZRR9 648 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 TBC1D21Q8IYX1 336 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 ASB2Q96Q27 587 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 NT5MQ9NPB1 228 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 SDR39U1Q9NRG7 319 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 TSC2P49815 1807 aa17.35■□□□□ 0.37
ARHGEF1-213ENST00000595897 HHLA1C9JL84 531 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 FGF10O15520 208 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 MSI1O43347 362 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 IDO1P14902 403 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 CYP2C18P33260 490 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 BMXP51813 675 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 ANKRD26P1Q6NSI1 321 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 ZC3H7AQ8IWR0 971 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 SMG8Q8ND04 991 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 RNF145Q96MT1 663 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 TRIM54Q9BYV2 358 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 INTS10Q9NVR2 710 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 MARCH4Q9P2E8 410 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 B4GAT1O43505 415 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 CES1P23141 567 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 CCR1P32246 355 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 ARSDP51689 593 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 MOGQ16653 247 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 ZNF792Q3KQV3 632 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 AASDHQ4L235 1098 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 NANOGP8Q6NSW7 305 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 BLOC1S3Q6QNY0 202 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 CENPSQ8N2Z9 138 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 PDZD8Q8NEN9 1154 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 PABPC5Q96DU9 382 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 TSPAN18Q96SJ8 248 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 FANCEQ9HB96 536 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 NEU3Q9UQ49 428 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 PCDHA9Q9Y5H5 950 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 PTCH2Q9Y6C5 1203 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 KANSL1LA0AUZ9 987 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 S1PR4O95977 384 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 RAB15P59190 212 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 NFATC3Q12968 1075 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 FBXO48Q5FWF7 155 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 TMEM125Q96AQ2 219 aa17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 DCPSQ96C86 337 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-213ENST00000595897 C1orf232A0A0U1RR37 186 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 SMIM35A0A1B0GVV1 85 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 FUOMA2VDF0 154 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 K7EPI3 171 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 TNPO2O14787 897 aaKnown RBP17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 MATN4O95460 622 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 BCL10O95999 233 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 FGF4P08620 206 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 ELK4P28324 431 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 SLC26A3P40879 764 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 MAGEA10P43363 369 aaPredicted RBP17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 HLCSP50747 726 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 NFKB2Q00653 900 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 RELAQ04206 551 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 NR1D2Q14995 579 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 FSCN1Q16658 493 aaKnown RBP17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 FAM117BQ6P1L5 589 aa17.33■□□□□ 0.37
ARHGEF1-213ENST00000595897 BPIFB6Q8NFQ5 453 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms