RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 BNC1Q01954 994 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 QPCTQ16769 361 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 KDELC2Q7Z4H8 507 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 CROCCP2Q86T23 111 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 FAM174AQ8TBP5 190 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 CCDC110Q8TBZ0 833 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 RMDN1Q96DB5 314 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 TRIB3Q96RU7 358 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 NAP1L3Q99457 506 aaPredicted RBP19.63■□□□□ 0.73
LSM4-203ENST00000593829 TMEM9BQ9NQ34 198 aa19.63■□□□□ 0.73
LSM4-203ENST00000593829 DOCK9Q9BZ29 2069 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 ANKRD66B4E2M5 251 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 F5H423 210 aaPredicted RBP19.62■□□□□ 0.73
LSM4-203ENST00000593829 TLR4O00206 839 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 FPGTO14772 594 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 MAGEC1O60732 1142 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 CLDN2P57739 230 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 ARHGEF7Q14155 803 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 AGERQ15109 404 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 PTPRRQ15256 657 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 SIX1Q15475 284 aaPredicted RBP19.62■□□□□ 0.73
LSM4-203ENST00000593829 OASLQ15646 514 aaKnown RBP19.62■□□□□ 0.73
LSM4-203ENST00000593829 CCNG2Q16589 344 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 GCNT7Q6ZNI0 430 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 KLHDC7BQ96G42 594 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 MLPHQ9BV36 600 aaPredicted RBP19.62■□□□□ 0.73
LSM4-203ENST00000593829 CENPHQ9H3R5 247 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 SNX11Q9Y5W9 270 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 PCDH15Q96QU1 1955 aa19.62■□□□□ 0.73
LSM4-203ENST00000593829 CAPN8A6NHC0 703 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 H0Y8X5 98 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 LHCGRP22888 699 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 STIP1P31948 543 aaKnown RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 CTSKP43235 329 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 WNT3AP56704 352 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 MAGOHP61326 146 aaKnown RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 MPP3Q13368 585 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 LRRC14Q15048 493 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 ACOX1Q15067 660 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 SNCBQ16143 134 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 CNGA3Q16281 694 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 KRT71Q3SY84 523 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 STPG1Q5TH74 334 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 CYB5D1Q6P9G0 228 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 KDELC1Q6UW63 502 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 ABI3BPQ7Z7G0 1075 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 PARP9Q8IXQ6 854 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 MINDY1Q8N5J2 469 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 NETO1Q8TDF5 533 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 CCT6BQ92526 530 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 MAGOHBQ96A72 148 aaKnown RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 PGM2Q96G03 612 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 OXNAD1Q96HP4 312 aaPredicted RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 FAM129AQ9BZQ8 928 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 MCM8Q9UJA3 840 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 ZNF148Q9UQR1 794 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 CDX4O14627 284 aaPredicted RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 TTI1O43156 1089 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 GCATO75600 419 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 ANXA9O76027 345 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 RECQL5O94762 991 aaPredicted RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 GSTA1P08263 222 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 LIMK1P53667 647 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 DHX9Q08211 1270 aaKnown RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 SNX1Q13596 522 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 GALNT3Q14435 633 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 PRPSAP1Q14558 356 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 HLA-BQ31612 363 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 DUPD1Q68J44 220 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 CRTC1Q6UUV9 634 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 ARHGEF18Q6ZSZ5 1173 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 TSPAN33Q86UF1 283 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 TP53I13Q8NBR0 393 aaPredicted RBP19.61■□□□□ 0.73
LSM4-203ENST00000593829 BMFQ96LC9 184 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 PPP1R2P1Q96PQ5 205 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 SMIM14Q96QK8 99 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 LYSMD1Q96S90 227 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 FMO2Q99518 471 aa19.61■□□□□ 0.73
LSM4-203ENST00000593829 CACNA1EQ15878 2313 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 POM121BA6NF01 834 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 PSMD11O00231 422 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 NDST3O95803 873 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 CER1O95813 267 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 EPOP01588 193 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 THEGLP0DJG4 465 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 ZNF30P17039 623 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 SCTRP47872 440 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 GEMP55040 296 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 GDF10P55107 478 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 NXPH1P58417 271 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 DHX34Q14147 1143 aaKnown RBP19.6■□□□□ 0.73
LSM4-203ENST00000593829 LRRC66Q68CR7 880 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 DENND2CQ68D51 928 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 KYAT3Q6YP21 454 aaKnown RBP19.6■□□□□ 0.73
LSM4-203ENST00000593829 CHMP6Q96FZ7 201 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 COQ10AQ96MF6 247 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 GAREM1Q9H706 876 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 HOMER3Q9NSC5 361 aa19.6■□□□□ 0.73
LSM4-203ENST00000593829 AAR2Q9Y312 384 aaKnown RBP19.6■□□□□ 0.73
LSM4-203ENST00000593829 LOC285095A0A1B0GVY8 99 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms