RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 FAM90A24PP0C7X0 464 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 HSPA1AP0DMV8 641 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 HSPA1BP0DMV9 641 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 ZNF24P17028 368 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ALDH1B1P30837 517 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 TSPAN7P41732 249 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 HDAC4P56524 1084 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 RIPK4P57078 832 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 GEMIN4P57678 1058 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 ADORA2A-AS1P86434 159 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 AKAP17AQ02040 695 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 CRYZQ08257 329 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 NEDD9Q14511 834 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ARHGEF6Q15052 776 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SHBQ15464 509 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 INAQ16352 499 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SOWAHAQ2M3V2 549 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 BOLA3Q53S33 107 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 DCAF6Q58WW2 860 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ZNF449Q6P9G9 518 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 MCM10Q7L590 875 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 NOXA1Q86UR1 476 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 TDRPQ86YL5 185 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ARMC8Q8IUR7 673 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 DHX40Q8IX18 779 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 CCDC105Q8IYK2 499 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 AFAP1Q8N556 730 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 NFKBIDQ8NI38 313 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ARRDC2Q8TBH0 407 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 LZICQ8WZA0 190 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 NEUROG1Q92886 237 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SKA1Q96BD8 255 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 ZNF479Q96JC4 524 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 BBS4Q96RK4 519 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SIN3AQ96ST3 1273 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 RHOXF2Q9BQY4 288 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 MXRA8Q9BRK3 442 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SLC26A6Q9BXS9 759 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 CAPS2Q9BXY5 557 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 MRPL9Q9BYD2 267 aaKnown RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 GLIS2Q9BZE0 524 aaPredicted RBP3.56□□□□□ -1.84
VMP1-212ENST00000591782 JMJD4Q9H9V9 463 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 CYSLTR2Q9NS75 346 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 HOMER3Q9NSC5 361 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 MPP6Q9NZW5 540 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 CARD8Q9Y2G2 431 aa3.56□□□□□ -1.84
VMP1-212ENST00000591782 SYNJ2BP-COX16A0A087WUM0 186 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 IGHV4-28A0A0C4DH34 117 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 A0A1W2PQM1 296 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 BCAT2O15382 392 aaPredicted RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 KCNAB3O43448 404 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 BAIAP3O94812 1187 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ERLIN2O94905 339 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 IVLP07476 585 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 NGFRP08138 427 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 RPSAP08865 295 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 ACAA1P09110 424 aaPredicted RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 KRT10P13645 584 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ITGAXP20702 1163 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 PSMA4P25789 261 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 EPHA8P29322 1005 aaPredicted RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 S100A5P33763 92 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 AMTP48728 403 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 HARS2P49590 506 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 CASP6P55212 293 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ST3GAL1Q11201 340 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 CRYMQ14894 314 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 PPP2R5BQ15173 497 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 RNPS1Q15287 305 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 TOMM20Q15388 145 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 RILPL1Q5EBL4 403 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 HYIQ5T013 277 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ARMC3Q5W041 872 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 TXNDC8Q6A555 127 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 IRGCQ6NXR0 463 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 PDXDC1Q6P996 788 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 TMCO3Q6UWJ1 677 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ANGPTL8Q6UXH0 198 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 PPP1R21Q6ZMI0 780 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 NEK10Q6ZWH5 1172 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 PCYOX1LQ8NBM8 494 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 OR14A16Q8NHC5 309 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 SPATA18Q8TC71 538 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 NEK9Q8TD19 979 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ANKRD49Q8WVL7 239 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 TRIB2Q92519 343 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 SNAPC3Q92966 411 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 ERGIC1Q969X5 290 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 CDCA5Q96FF9 252 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 TXNDC15Q96J42 360 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 LYZL4Q96KX0 146 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 CCDC114Q96M63 670 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 NTPCRQ9BSD7 190 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 USP44Q9H0E7 712 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 NSRP1Q9H0G5 558 aaKnown RBP3.55□□□□□ -1.84
VMP1-212ENST00000591782 ABCG4Q9H172 646 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 CCDC68Q9H2F9 335 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 TNMDQ9H2S6 317 aa3.55□□□□□ -1.84
VMP1-212ENST00000591782 SMYD2Q9NRG4 433 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms