RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SEMA4FO95754 770 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 CAPNS1P04632 268 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PRKCGP05129 697 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 SERPINF2P08697 491 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ADRB3P13945 408 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 C5AR1P21730 350 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PSMB4P28070 264 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 CD6P30203 668 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 DRD3P35462 400 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 P2RY2P41231 377 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 VPS41P49754 854 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 NEK3P51956 506 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 TERF1P54274 439 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 EPHB1P54762 984 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ADPRHP54922 357 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZBTB16Q05516 673 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF33AQ06730 810 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 WASHC5Q12768 1159 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 TRAF2Q12933 501 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 XRCC4Q13426 336 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 BYSLQ13895 437 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 GALNT3Q14435 633 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 GRM3Q14832 879 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ELF2Q15723 593 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF528Q3MIS6 628 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF805Q5CZA5 627 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 AGBL4Q5VU57 503 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ERN2Q76MJ5 926 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 UBE3DQ7Z6J8 389 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 KBTBD6Q86V97 674 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZSCAN30Q86W11 494 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 CAMK1DQ8IU85 385 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF567Q8N184 647 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 DEFB119Q8N690 84 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 TEX26Q8N6G2 289 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 FRMD1Q8N878 549 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 LPCAT1Q8NF37 534 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 IPMKQ8NFU5 416 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 OR14C36Q8NHC7 312 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 GAB3Q8WWW8 586 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 ATOH1Q92858 354 aaPredicted RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 FATE1Q969F0 183 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PPP1R14AQ96A00 147 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 MAGOHBQ96A72 148 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 TOE1Q96GM8 510 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 SPATA13Q96N96 652 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 NUDCD1Q96RS6 583 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 TUBGCP5Q96RT8 1024 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 RBM15Q96T37 977 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 IL12RB2Q99665 862 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PRRX2Q99811 253 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 WRAP53Q9BUR4 548 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 LGR4Q9BXB1 951 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 GPR174Q9BXC1 333 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 FSD1LQ9BXM9 530 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 FRMD8P1Q9BZ68 369 aaPredicted RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 GBA3Q9H227 469 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 NOD2Q9HC29 1040 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 GLOD4Q9HC38 313 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 USP36Q9P275 1121 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 EBF1Q9UH73 591 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 RAB23Q9ULC3 237 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 SCML1Q9UN30 329 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 SMG5Q9UPR3 1016 aaKnown RBP6.44□□□□□ -1.38
VPS4B-205ENST00000591383 MAPRE3Q9UPY8 281 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PCDHGA2Q9Y5H1 932 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 RAI2Q9Y5P3 530 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 SAR1BQ9Y6B6 198 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 PLXNA2O75051 1894 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 MYO15AQ9UKN7 3530 aa6.44□□□□□ -1.38
VPS4B-205ENST00000591383 DMDP11532 3685 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 GPR179Q6PRD1 2367 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 BCLAF3A2AJT9 711 aaKnown RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 MEGF11A6BM72 1044 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 LRRC72A6NJI9 287 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 C16orf96A6NNT2 1141 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 KIF2AO00139 706 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 CES2O00748 559 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 OPHN1O60890 802 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 URI1O94763 535 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 FSBPO95073 299 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PCDH8O95206 1070 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 MT-CYBP00156 380 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 VSIG8P0DPA2 414 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 CTPS1P17812 591 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 CR2P20023 1033 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 MAT2AP31153 395 aaKnown RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 HOXA6P31267 233 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ACSL1P33121 698 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 ACTN2P35609 894 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PAFAH1B1P43034 410 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 KCNJ1P48048 391 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 LMAN1P49257 510 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 DHPSP49366 369 aaPredicted RBP6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PPP2CBP62714 309 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 PPP2CAP67775 309 aa6.43□□□□□ -1.38
VPS4B-205ENST00000591383 SEMG2Q02383 582 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms