RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TMEM145Q8NBT3 493 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 OR13C4Q8NGS5 318 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 OR13J1Q8NGT2 312 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 LOXL4Q96JB6 756 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 ZNF778Q96MU6 729 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 PWWP2AQ96N64 755 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 EBNA1BP2Q99848 306 aaKnown RBP12.02□□□□□ -0.49
APOC1-206ENST00000590334 NAT9Q9BTE0 207 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 ABCG8Q9H221 673 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 FAM83DQ9H4H8 585 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 CHRAC1Q9NRG0 131 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 TREX1Q9NSU2 369 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 SAMD15Q9P1V8 674 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 HS3ST3A1Q9Y663 406 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 R4GN57 208 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 TMEM131Q92545 1883 aa12.02□□□□□ -0.49
APOC1-206ENST00000590334 TOR1BO14657 336 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 SLC31A1O15431 190 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 BUD23O43709 281 aaKnown RBP12.01□□□□□ -0.49
APOC1-206ENST00000590334 SOD1P00441 154 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 SLC4A1P02730 911 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 PYGLP06737 847 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 TSHRP16473 764 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 AKT2P31751 481 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 HOXD12P35452 270 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 IGFALSP35858 605 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 TRIM23P36406 574 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 SPAM1P38567 509 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 DPP6P42658 865 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 XIAPP98170 497 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 PTPRCAPQ14761 206 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 IRF4Q15306 451 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 LYSMD4Q5XG99 296 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 PDPK2PQ6A1A2 396 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 PNCKQ6P2M8 343 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 GCNT7Q6ZNI0 430 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 CENPUQ71F23 418 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 ABI3BPQ7Z7G0 1075 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 CCNJLQ8IV13 435 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 IFT81Q8WYA0 676 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 AP2M1Q96CW1 435 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 STAMBPL1Q96FJ0 436 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 CDKN2AIPNLQ96HQ2 116 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 SGSM3Q96HU1 749 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 SERAC1Q96JX3 654 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 DNAJC1Q96KC8 554 aaKnown RBP12.01□□□□□ -0.49
APOC1-206ENST00000590334 BMFQ96LC9 184 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 WDR83Q9BRX9 315 aaKnown RBP12.01□□□□□ -0.49
APOC1-206ENST00000590334 ZSCAN5AQ9BUG6 496 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 TSPYL1Q9H0U9 437 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 SEMA4AQ9H3S1 761 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 BPIFA1Q9NP55 256 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 IL26Q9NPH9 171 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 MBNL1Q9NR56 388 aaKnown RBP12.01□□□□□ -0.49
APOC1-206ENST00000590334 EIF2B4Q9UI10 523 aaKnown RBP12.01□□□□□ -0.49
APOC1-206ENST00000590334 APPL1Q9UKG1 709 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 PILRBQ9UKJ0 227 aa12.01□□□□□ -0.49
APOC1-206ENST00000590334 PCDH15Q96QU1 1955 aa12□□□□□ -0.49
APOC1-206ENST00000590334 AGAP14A8MT82 685 aa12□□□□□ -0.49
APOC1-206ENST00000590334 FPGTO14772 594 aa12□□□□□ -0.49
APOC1-206ENST00000590334 BANF1O75531 89 aa12□□□□□ -0.49
APOC1-206ENST00000590334 USP1O94782 785 aa12□□□□□ -0.49
APOC1-206ENST00000590334 TTC4O95801 387 aa12□□□□□ -0.49
APOC1-206ENST00000590334 POLBP06746 335 aa12□□□□□ -0.49
APOC1-206ENST00000590334 HOXC4P09017 264 aaPredicted RBP12□□□□□ -0.49
APOC1-206ENST00000590334 PGAM1P18669 254 aa12□□□□□ -0.49
APOC1-206ENST00000590334 ITPKAP23677 461 aa12□□□□□ -0.49
APOC1-206ENST00000590334 NMBRP28336 390 aa12□□□□□ -0.49
APOC1-206ENST00000590334 NBL1P41271 181 aa12□□□□□ -0.49
APOC1-206ENST00000590334 ELK3P41970 407 aa12□□□□□ -0.49
APOC1-206ENST00000590334 DHPSP49366 369 aaPredicted RBP12□□□□□ -0.49
APOC1-206ENST00000590334 PFN3P60673 137 aa12□□□□□ -0.49
APOC1-206ENST00000590334 RACK1P63244 317 aaKnown RBP12□□□□□ -0.49
APOC1-206ENST00000590334 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
APOC1-206ENST00000590334 PEX6Q13608 980 aa12□□□□□ -0.49
APOC1-206ENST00000590334 BBS9Q3SYG4 887 aa12□□□□□ -0.49
APOC1-206ENST00000590334 ANKRD20A4Q4UJ75 823 aa12□□□□□ -0.49
APOC1-206ENST00000590334 CASC4Q6P4E1 433 aa12□□□□□ -0.49
APOC1-206ENST00000590334 ADAMTSL4Q6UY14 1074 aa12□□□□□ -0.49
APOC1-206ENST00000590334 KYAT3Q6YP21 454 aaKnown RBP12□□□□□ -0.49
APOC1-206ENST00000590334 CEP128Q6ZU80 1094 aa12□□□□□ -0.49
APOC1-206ENST00000590334 IQCHQ86VS3 1027 aa12□□□□□ -0.49
APOC1-206ENST00000590334 RELL1Q8IUW5 271 aa12□□□□□ -0.49
APOC1-206ENST00000590334 IGDCC3Q8IVU1 814 aa12□□□□□ -0.49
APOC1-206ENST00000590334 PELI3Q8N2H9 469 aa12□□□□□ -0.49
APOC1-206ENST00000590334 TRAM1L1Q8N609 369 aa12□□□□□ -0.49
APOC1-206ENST00000590334 PLA2G15Q8NCC3 412 aa12□□□□□ -0.49
APOC1-206ENST00000590334 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12□□□□□ -0.49
APOC1-206ENST00000590334 SNX19Q92543 992 aa12□□□□□ -0.49
APOC1-206ENST00000590334 UBXN4Q92575 508 aa12□□□□□ -0.49
APOC1-206ENST00000590334 SCAMP4Q969E2 229 aa12□□□□□ -0.49
APOC1-206ENST00000590334 MFSD3Q96ES6 412 aa12□□□□□ -0.49
APOC1-206ENST00000590334 VPS35Q96QK1 796 aa12□□□□□ -0.49
APOC1-206ENST00000590334 FMO2Q99518 471 aa12□□□□□ -0.49
APOC1-206ENST00000590334 RIOK2Q9BVS4 552 aaKnown RBP12□□□□□ -0.49
APOC1-206ENST00000590334 TM9SF3Q9HD45 589 aa12□□□□□ -0.49
APOC1-206ENST00000590334 FZD3Q9NPG1 666 aa12□□□□□ -0.49
APOC1-206ENST00000590334 GPR27Q9NS67 375 aa12□□□□□ -0.49
APOC1-206ENST00000590334 MTRF1LQ9UGC7 380 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms