RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PKD2L2Q9NZM6 624 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 PADI4Q9UM07 663 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 CLCA2Q9UQC9 943 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 TMEM98Q9Y2Y6 226 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 U3KQA8 63 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 ACACAQ13085 2346 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 COL5A1P20908 1838 aaPredicted RBP12.04□□□□□ -0.48
TPM4-212ENST00000590180 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 PLXNB3Q9ULL4 1909 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 A0A0U1RQJ8 604 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 PRSS38A1L453 326 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 EME2A4GXA9 379 aaPredicted RBP12.04□□□□□ -0.48
TPM4-212ENST00000590180 HACD1B0YJ81 288 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 F5H423 210 aaPredicted RBP12.04□□□□□ -0.48
TPM4-212ENST00000590180 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 INPP4BO15327 924 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 ASMTLO95671 621 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 APOC2P02655 101 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 CEACAM5P06731 702 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 GP1BAP07359 652 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 PIRTP0C851 137 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 PYGMP11217 842 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 NFKB1P19838 968 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 TEAD1P28347 426 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 TNNT3P45378 269 aaPredicted RBP12.04□□□□□ -0.48
TPM4-212ENST00000590180 GNPDA1P46926 289 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 POLD2P49005 469 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 GSDMDP57764 484 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 WASHC5Q12768 1159 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 NLRP8Q86W28 1048 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 SLC35F3Q8IY50 421 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 SYCE1Q8N0S2 351 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 UBL4BQ8N7F7 174 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 LRRC57Q8N9N7 239 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 MDM1Q8TC05 714 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 LYSMD1Q96S90 227 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 AGAP2Q99490 1192 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 FERMT1Q9BQL6 677 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 DPEP2Q9H4A9 486 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 ZFYVE1Q9HBF4 777 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 FAM153AQ9UHL3 310 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 SHOC2Q9UQ13 582 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 GPSM3Q9Y4H4 160 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 AK5Q9Y6K8 562 aa12.04□□□□□ -0.48
TPM4-212ENST00000590180 URB1O60287 2271 aaKnown RBP12.04□□□□□ -0.48
TPM4-212ENST00000590180 PTPRBP23467 1997 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 TJP3O95049 919 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 NDST3O95803 873 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 FTCDO95954 541 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 SLC4A1P02730 911 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 FUCA1P04066 466 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 PYGLP06737 847 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 RBL1P28749 1068 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 CD68P34810 354 aaPredicted RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 SPINT3P49223 89 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 WNT3AP56704 352 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 OTUD4Q01804 1114 aaKnown RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 XRCC4Q13426 336 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 AADACL2Q6P093 401 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 DARS2Q6PI48 645 aaKnown RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 ADAMTSL4Q6UY14 1074 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 MARK2Q7KZI7 788 aaKnown RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 ZNF765Q7L2R6 523 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 LYSMD3Q7Z3D4 306 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 ZNF567Q8N184 647 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 ARL10Q8N8L6 244 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 ACTL9Q8TC94 416 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 ALG3Q92685 438 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 NAT6Q93015 286 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 HIC2Q96JB3 615 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 QKIQ96PU8 341 aaKnown RBP eCLIP12.03□□□□□ -0.48
TPM4-212ENST00000590180 TRIB3Q96RU7 358 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 VAT1Q99536 393 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 HERPUD2Q9BSE4 406 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 FRMD8Q9BZ67 464 aaPredicted RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 GPR63Q9BZJ6 419 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 SYNDIG1Q9H7V2 258 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 MAGEE1Q9HCI5 957 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 SUFUQ9UMX1 484 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 PACSIN2Q9UNF0 486 aaPredicted RBP12.03□□□□□ -0.48
TPM4-212ENST00000590180 EFR3BQ9Y2G0 817 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 APC2O95996 2303 aa12.03□□□□□ -0.48
TPM4-212ENST00000590180 RP1P56715 2156 aa12.02□□□□□ -0.48
TPM4-212ENST00000590180 RGSL1A5PLK6 1076 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 ILF3Q12906 894 aaKnown RBP eCLIP12.02□□□□□ -0.49
TPM4-212ENST00000590180 NOMO1Q15155 1222 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 PERM1Q5SV97 790 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 ALS2CLQ60I27 953 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 TMC3Q7Z5M5 1100 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 TRIM74Q86UV6 250 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 RAVER1Q8IY67 606 aaKnown RBP12.02□□□□□ -0.49
TPM4-212ENST00000590180 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 SLC25A41Q8N5S1 370 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 DCBLD1Q8N8Z6 715 aa12.02□□□□□ -0.49
TPM4-212ENST00000590180 KYQ8NBH2 561 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms