RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 PGM2Q96G03 612 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 SHDQ96IW2 340 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 CPNE1Q99829 537 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 MCMBPQ9BTE3 642 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 FAM96AQ9H5X1 160 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 FBRSQ9HAH7 460 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 FBXO6Q9NRD1 293 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 CATSPERZQ9NTU4 200 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 C2orf42Q9NWW7 574 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 CD84Q9UIB8 345 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 ZNF180Q9UJW8 692 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 NOVA2Q9UNW9 492 aaKnown RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 MRPS17Q9Y2R5 130 aaKnown RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 FADS3Q9Y5Q0 445 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 LRRK1Q38SD2 2015 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 HMX2A2RU54 273 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 FAM170BA6NMN3 283 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 CHURC1-FNTBB4DL54 471 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 CD3EAPO15446 510 aaKnown RBP11.27□□□□□ -0.61
VMP1-207ENST00000588131 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.61
VMP1-207ENST00000588131 DNTTP04053 509 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 C7P10643 843 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 GABRG2P18507 467 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 NDUFV2P19404 249 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 SPAM1P38567 509 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 SPINT3P49223 89 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 LIG3P49916 1009 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 SUOXP51687 545 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 ELP6Q0PNE2 266 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 FASTKD1Q53R41 847 aaKnown RBP11.27□□□□□ -0.61
VMP1-207ENST00000588131 ZNF789Q5FWF6 425 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 GRTP1Q5TC63 336 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 TRIM67Q6ZTA4 783 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 TECPR1Q7Z6L1 1165 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 CILP2Q8IUL8 1156 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 SYNPOQ8N3V7 929 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 GPR150Q8NGU9 434 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 CALML6Q8TD86 181 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 RAB7BQ96AH8 199 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 FAM131CQ96AQ9 280 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 TLCD1Q96CP7 247 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 ATXN7L3BQ96GX2 97 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 MRGPRX1Q96LB2 322 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 ATP6V1G3Q96LB4 118 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 RBBP8Q99708 897 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 C19orf43Q9BQ61 176 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 IL26Q9NPH9 171 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 MED4Q9NPJ6 270 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 CD93Q9NPY3 652 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 NSMCE4AQ9NXX6 385 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 PKD2L2Q9NZM6 624 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 FBXO5Q9UKT4 447 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 COQ6Q9Y2Z9 468 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 IKBKGQ9Y6K9 419 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 PRUNE2Q8WUY3 3088 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 COL6A3P12111 3177 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 PLXNA2O75051 1894 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 F5P12259 2224 aa11.27□□□□□ -0.61
VMP1-207ENST00000588131 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 IQANK1A0A1B0GTG1 560 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 A0A1W2PPM1 405 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 TRIM49D1C9J1S8 452 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 MMP20O60882 483 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 SRP72O76094 671 aaKnown RBP11.26□□□□□ -0.61
VMP1-207ENST00000588131 HAUS5O94927 633 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 PRAMEF1O95521 474 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 S1PR4O95977 384 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 AHSGP02765 367 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 ELFN1P0C7U0 828 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 OGNP20774 298 aaKnown RBP11.26□□□□□ -0.61
VMP1-207ENST00000588131 ETV3P41162 512 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 SERPINB9P50453 376 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 LIMK2P53671 638 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 CSE1LP55060 971 aaKnown RBP11.26□□□□□ -0.61
VMP1-207ENST00000588131 GPS2Q13227 327 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 ACOX1Q15067 660 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 CHRNA6Q15825 494 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 TYSND1Q2T9J0 566 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 ZRANB3Q5FWF4 1079 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 CNSTQ6PJW8 725 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 KIAA1324Q6UXG2 1013 aaKnown RBP11.26□□□□□ -0.61
VMP1-207ENST00000588131 Q6ZVL8 140 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 SYT13Q7L8C5 426 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 ZC3HC1Q86WB0 502 aaKnown RBP11.26□□□□□ -0.61
VMP1-207ENST00000588131 LMNTD2Q8IXW0 634 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 PIANPQ8IYJ0 282 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 ACVR1CQ8NER5 493 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 SCAMP4Q969E2 229 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 SIPA1Q96FS4 1042 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 COQ10AQ96MF6 247 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 NELL2Q99435 816 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 OMDQ99983 421 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 FBXL12Q9NXK8 326 aa11.26□□□□□ -0.61
VMP1-207ENST00000588131 TXNDC16Q9P2K2 825 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms