RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 USP45Q70EL2 814 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 DSG4Q86SJ6 1040 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 LONP2Q86WA8 852 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 PGBD3Q8N328 593 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 ZBTB44Q8NCP5 570 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 ACMSDQ8TDX5 336 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 STYXQ8WUJ0 223 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 PIH1D2Q8WWB5 315 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 ZNF669Q96BR6 464 aaPredicted RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 HDAC8Q9BY41 377 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 CDH19Q9H159 772 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 RAD18Q9NS91 495 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 MKS1Q9NXB0 559 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 FBXL12Q9NXK8 326 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 DLL3Q9NYJ7 618 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 WSB2Q9NYS7 404 aaPredicted RBP12.64□□□□□ -0.39
VMP1-202ENST00000585847 UBP1Q9NZI7 540 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
VMP1-202ENST00000585847 BCCIPQ9P287 314 aaKnown RBP eCLIP12.64□□□□□ -0.39
VMP1-202ENST00000585847 SCML1Q9UN30 329 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 CYP8B1Q9UNU6 501 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 INVSQ9Y283 1065 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 PCDHGA2Q9Y5H1 932 aa12.64□□□□□ -0.39
VMP1-202ENST00000585847 TRPM6Q9BX84 2022 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 ZCWPW2A0A1B0GU75 182 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 ANKRD66B4E2M5 251 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 LILRB5O75023 590 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 USP12O75317 370 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 PRKCGP05129 697 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 SNRPAP09012 282 aaKnown RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 NR1D1P20393 614 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 ACSL1P33121 698 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 SPRP35270 261 aaPredicted RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 EPHB1P54762 984 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 OLIG2Q13516 323 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 SPARCL1Q14515 664 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 PCSK7Q16549 785 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 LRRC73Q5JTD7 316 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 TSTD2Q5T7W7 516 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 RNF187Q5TA31 235 aaPredicted RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 KDM7AQ6ZMT4 941 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 ERN2Q76MJ5 926 aaKnown RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 KCNMB4Q86W47 210 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 IGDCC3Q8IVU1 814 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 CTAGE3PQ8IX95 158 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 AGGF1Q8N302 714 aaeCLIP12.63□□□□□ -0.39
VMP1-202ENST00000585847 OR2W6PQ8NHA6 318 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 DTX3LQ8TDB6 740 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 EPS8L3Q8TE67 593 aaKnown RBP12.63□□□□□ -0.39
VMP1-202ENST00000585847 CABS1Q96KC9 395 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 GGT7Q9UJ14 662 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 PHTF1Q9UMS5 762 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 CHKBQ9Y259 395 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 PPIL1Q9Y3C6 166 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 DNAH14Q0VDD8 3507 aa12.63□□□□□ -0.39
VMP1-202ENST00000585847 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 TLDC2A0PJX2 215 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 H3BQF6 201 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 H7C0S8 307 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 AREL1O15033 823 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 PLRG1O43660 514 aaKnown RBP12.62□□□□□ -0.39
VMP1-202ENST00000585847 RNASEH2AO75792 299 aaKnown RBP12.62□□□□□ -0.39
VMP1-202ENST00000585847 C1QAP02745 245 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 ADRB3P13945 408 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 KRT15P19012 456 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 OGNP20774 298 aaKnown RBP12.62□□□□□ -0.39
VMP1-202ENST00000585847 PPARGP37231 505 aaPredicted RBP12.62□□□□□ -0.39
VMP1-202ENST00000585847 NEK3P51956 506 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 ADPRHP54922 357 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 CCDC15Q0P6D6 951 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 RALGDSQ12967 914 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 THOC5Q13769 683 aaKnown RBP12.62□□□□□ -0.39
VMP1-202ENST00000585847 POU6F1Q14863 301 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 TTMPQ5BVD1 217 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 CERCAMQ5T4B2 595 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 SYCP2LQ5T4T6 812 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 MRNIPQ6NTE8 343 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 AFTPHQ6ULP2 937 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 TIFABQ6ZNK6 161 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 GLT6D1Q7Z4J2 308 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 FAM124AQ86V42 546 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 PPM1NQ8N819 430 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 PPP1R16AQ96I34 528 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 MCCC1Q96RQ3 725 aaPredicted RBP12.62□□□□□ -0.39
VMP1-202ENST00000585847 SMC6Q96SB8 1091 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 TCF12Q99081 682 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 TTC1Q99614 292 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 ZSCAN32Q9NX65 697 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 FZD4Q9ULV1 537 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 ITM2BQ9Y287 266 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 FADS3Q9Y5Q0 445 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 SPAG17Q6Q759 2223 aa12.62□□□□□ -0.39
VMP1-202ENST00000585847 SCN8AQ9UQD0 1980 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms