RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 HELZP42694 1942 aaKnown RBP10.39□□□□□ -0.75
LIG3-203ENST00000585370 MIA3Q5JRA6 1907 aa10.39□□□□□ -0.75
LIG3-203ENST00000585370 NCOR2Q9Y618 2525 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 CCDC162PA2VCL2 907 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 WASH3PC4AMC7 463 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 GOLGA8TH3BQL2 631 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 SMAD6O43541 496 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 GJB3O75712 270 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 HAUS5O94927 633 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 KLHL2O95198 593 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 GOT2P00505 430 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 PROCP04070 461 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 PDHA1P08559 390 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 CPA3P15088 417 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 CD9P21926 228 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 FCARP24071 287 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 TARSP26639 723 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 HMGCLP35914 325 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 RECQLP46063 649 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 TTPAP49638 278 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 ARSDP51689 593 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 POLR2LP62875 67 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 TMPRSS15P98073 1019 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 MPP1Q00013 466 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 STX3Q13277 289 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 ZKSCAN8Q15776 578 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 TYSND1Q2T9J0 566 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 FUT11Q495W5 492 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 FAM78AQ5JUQ0 283 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 DGKKQ5KSL6 1271 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 ATXN7L2Q5T6C5 722 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 ZDHHC20Q5W0Z9 365 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 C22orf39Q6P5X5 142 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 ZC3H14Q6PJT7 736 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 CERS6Q6ZMG9 384 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 TPRG1Q6ZUI0 275 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 CCDC121Q6ZUS5 278 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 STK40Q8N2I9 435 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 CBARPQ8N350 705 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 TTC30BQ8N4P2 665 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 GBP7Q8N8V2 638 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 KDM1BQ8NB78 822 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 SUMF1Q8NBK3 374 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 MDGA1Q8NFP4 955 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 OR4K2Q8NGD2 314 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 PPP1R14CQ8TAE6 165 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 HCAR2Q8TDS4 363 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 PDCD6IPQ8WUM4 868 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.38□□□□□ -0.75
LIG3-203ENST00000585370 CLDN23Q96B33 292 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 LRIG1Q96JA1 1093 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 ELMO2Q96JJ3 720 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 DNAJC1Q96KC8 554 aaKnown RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 NSMCE3Q96MG7 304 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 C7orf26Q96N11 449 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 ASB16Q96NS5 453 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 LYSMD1Q96S90 227 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 TRIM55Q9BYV6 548 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 GPR63Q9BZJ6 419 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 SUV39H2Q9H5I1 410 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 FAM96AQ9H5X1 160 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 NMRAL1Q9HBL8 299 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 HEBP1Q9NRV9 189 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 THAP1Q9NVV9 213 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 HECAQ9UBI9 543 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 EVLQ9UI08 416 aaPredicted RBP10.38□□□□□ -0.75
LIG3-203ENST00000585370 GGT7Q9UJ14 662 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 APPL1Q9UKG1 709 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 KCTD3Q9Y597 815 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 PCDHB9Q9Y5E1 797 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 SPTBN2O15020 2390 aa10.38□□□□□ -0.75
LIG3-203ENST00000585370 A0A0J9YYE9 177 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CCT8L1PA6NM43 557 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 GOLGA8CPA6NN73 597 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 K7ERQ8 282 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 LAMTOR5O43504 91 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 NDUFS3O75489 264 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ZNF821O75541 412 aaPredicted RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 SNUPNO95149 360 aaKnown RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 TRBC1P01850 177 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 RBP1P09455 135 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ADH5P11766 374 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 BGNP21810 368 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ABL2P42684 1182 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 DGKGP49619 791 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 STC1P52823 247 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 CSTF1Q05048 431 aaKnown RBP10.37□□□□□ -0.75
LIG3-203ENST00000585370 GRM2Q14416 872 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 E2F5Q15329 346 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 DLG2Q15700 870 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 FAM83EQ2M2I3 478 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 EML3Q32P44 896 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ZNF528Q3MIS6 628 aa10.37□□□□□ -0.75
LIG3-203ENST00000585370 ACCSLQ4AC99 568 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms