RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 FOXRED2Q8IWF2 684 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 RPAP2Q8IXW5 612 aaPredicted RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 TMED6Q8WW62 240 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 MIB2Q96AX9 1013 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 RSRC1Q96IZ7 334 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 GAD1Q99259 594 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 NTPCRQ9BSD7 190 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 MMTAG2Q9BU76 263 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 MAK16Q9BXY0 300 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 CCDC68Q9H2F9 335 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 PLK3Q9H4B4 646 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 MMP25Q9NPA2 562 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 NSMCE4AQ9NXX6 385 aa5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 ATXN2Q99700 1313 aaKnown RBP5.62□□□□□ -1.51
SMARCE1-219ENST00000583294 A0A1W2PQ09 198 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 SOCS6O14544 535 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 ATP2A1O14983 1001 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 ALPLP05186 524 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 PRSS2P07478 247 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 ACAA1P09110 424 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CSH1P0DML2 217 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CSH2P0DML3 217 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CDKN2AP42771 156 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CAMPP49913 170 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 DHX34Q14147 1143 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 ADIPOQQ15848 244 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 AMZ1Q400G9 498 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 PPP6R3Q5H9R7 873 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 JADE1Q6IE81 842 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 DUS1LQ6P1R4 473 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CRELD2Q6UXH1 353 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 TAGAPQ8N103 731 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 PGBD5Q8N414 524 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 C1orf131Q8NDD1 294 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 OR8K5Q8NH50 307 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 B4GALNT2Q8NHY0 566 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 GRAMD2BQ96HH9 432 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 PGAM5Q96HS1 289 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 OR2A14Q96R47 310 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 PIGMQ9H3S5 423 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 C17orf75Q9HAS0 396 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 SEBOXQ9HB31 216 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 OCIAD1Q9NX40 245 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 OGFRQ9NZT2 677 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CWC15Q9P013 229 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 COPG2Q9UBF2 871 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 CLIC4Q9Y696 253 aa5.61□□□□□ -1.51
SMARCE1-219ENST00000583294 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 PLRG1O43660 514 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 TSPAN9O75954 239 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 TPPPO94811 219 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 KCNK5O95279 499 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 ANXA7P20073 488 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 BDKRB2P30411 391 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 HTR6P50406 440 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 TAS2R40P59535 323 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 TFAP4Q01664 338 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 GRIK2Q13002 908 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 CDC16Q13042 620 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 ACVR2BQ13705 512 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 CTF1Q16619 201 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 XKR9Q5GH70 373 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 FAM69BQ5VUD6 431 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 TMEM198Q66K66 360 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 C8orf82Q6P1X6 216 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 DLK2Q6UY11 383 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 SDCCAG8Q86SQ7 713 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 RNF168Q8IYW5 571 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 CLIP4Q8N3C7 705 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 HMGCLL1Q8TB92 370 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 ORAI1Q96D31 301 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 SEPT5Q99719 369 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 SH3GL2Q99962 352 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 NUDT16L1Q9BRJ7 211 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 OR14J1Q9UGF5 321 aa5.6□□□□□ -1.51
SMARCE1-219ENST00000583294 CPED1A4D0V7 1026 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 SRPRAP08240 638 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 DDX5P17844 614 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 ACSL1P33121 698 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 PRCPP42785 496 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 RAD23BP54727 409 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 CSNK2A1P68400 391 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 ZBED6P86452 979 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 HLFQ16534 295 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 PNLIPRP3Q17RR3 467 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 RAB41Q5JT25 222 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 EFHC1Q5JVL4 640 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 PMS2CLQ68D20 193 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 KCTD18Q6PI47 426 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 CFAP77Q6ZQR2 320 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 CACNA2D4Q7Z3S7 1137 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 CSNK2A3Q8NEV1 391 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 OR2AK2Q8NG84 335 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 APBB2Q92870 758 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 NEUROG1Q92886 237 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 MTBPQ96DY7 904 aa5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 SAT2Q96F10 170 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-219ENST00000583294 MXD3Q9BW11 206 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms