RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 OR51F1A6NGY5 319 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 CAPN8A6NHC0 703 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 NEDD8-MDP1E9PL57 170 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 TK2O00142 265 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PRMT5O14744 637 aaPredicted RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 BUD23O43709 281 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 LYPLA1O75608 230 aaPredicted RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 PIGNO95427 931 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 LMNAP02545 664 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 SRPRAP08240 638 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 SRCP12931 536 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 RPS3P23396 243 aaKnown RBP eCLIP11.09□□□□□ -0.63
SKA2-204ENST00000578519 TARSP26639 723 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 SLC8A1P32418 973 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 CD70P32970 193 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 SPAM1P38567 509 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 RGS4P49798 205 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 IDH3AP50213 366 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 NUBP1P53384 320 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 IL2P60568 153 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 ELF3P78545 371 aaPredicted RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 ZXDBP98169 803 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 NFKB2Q00653 900 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 ZNF77Q15935 545 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 SNCBQ16143 134 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PTPRNQ16849 979 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 PRSS36Q5K4E3 855 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 ATXN7L2Q5T6C5 722 aaPredicted RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 PTRHD1Q6GMV3 140 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 C22orf39Q6P5X5 142 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 CYB5D1Q6P9G0 228 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 BRAT1Q6PJG6 821 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 EPGNQ6UW88 154 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 TRIM67Q6ZTA4 783 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 EFL1Q7Z2Z2 1120 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 SNX20Q7Z614 316 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 TMPRSS6Q8IU80 811 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PARP9Q8IXQ6 854 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 RBFAQ8N0V3 343 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 ACVR1CQ8NER5 493 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 LPGAT1Q92604 370 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 KCNJ9Q92806 393 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 KIAA1191Q96A73 305 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 LYSMD1Q96S90 227 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 SORT1Q99523 831 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 OLFM1Q99784 485 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 OSBPL1AQ9BXW6 950 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 CLPBQ9H078 707 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 POMKQ9H5K3 350 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 TLE6Q9H808 572 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PNPOQ9NVS9 261 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 POLR3BQ9NW08 1133 aaPredicted RBP11.09□□□□□ -0.63
SKA2-204ENST00000578519 HCFC1R1Q9NWW0 138 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PLK2Q9NYY3 685 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 FKBPLQ9UIM3 349 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 GNPTGQ9UJJ9 305 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 CDYLQ9Y232 598 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 STK38LQ9Y2H1 464 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 PPIL1Q9Y3C6 166 aa11.09□□□□□ -0.63
SKA2-204ENST00000578519 C1orf232A0A0U1RR37 186 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 MATN2O00339 956 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 GIPC1O14908 333 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 MGRN1O60291 552 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 RFPL2O75678 378 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 GJB3O75712 270 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 WFS1O76024 890 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 NFATC1O95644 943 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 MT-CO1P00395 513 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 S100BP04271 92 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 TYRP14679 529 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 EPCAMP16422 314 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 AOC1P19801 751 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 NCF2P19878 526 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 CHRM3P20309 590 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 XPAP23025 273 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 ALDH18A1P54886 795 aaKnown RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 MXRA7P84157 204 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 SATB1Q01826 763 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 DLG1Q12959 904 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 TTLL9Q3SXZ7 439 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 ZNF789Q5FWF6 425 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 ARL13AQ5H913 290 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 SH2D4BQ5SQS7 431 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 WASHC2DQ5SRD0 308 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 GRASPQ7Z6J2 395 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 LDB1Q86U70 411 aaPredicted RBP11.08□□□□□ -0.64
SKA2-204ENST00000578519 TMEM25Q86YD3 366 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 CAMK1DQ8IU85 385 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 MFSD6LQ8IWD5 586 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 TMEM151AQ8N4L1 468 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 WFDC5Q8TCV5 224 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 TCEAL4Q96EI5 215 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 L3HYPDHQ96EM0 354 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 SCRN2Q96FV2 425 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 LMLNQ96KR4 655 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 HEPHQ9BQS7 1158 aa11.08□□□□□ -0.64
SKA2-204ENST00000578519 C1orf21Q9H246 121 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms