RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 EBF2Q9HAK2 575 aa5.23□□□□□ -1.57
NUP88-213ENST00000576862 PLSCR4Q9NRQ2 329 aa5.23□□□□□ -1.57
NUP88-213ENST00000576862 MCM9Q9NXL9 1143 aa5.23□□□□□ -1.57
NUP88-213ENST00000576862 CNOT8Q9UFF9 292 aaKnown RBP5.23□□□□□ -1.57
NUP88-213ENST00000576862 PSAT1Q9Y617 370 aa5.23□□□□□ -1.57
NUP88-213ENST00000576862 GOLGA3Q08378 1498 aa5.23□□□□□ -1.57
NUP88-213ENST00000576862 PDS5BQ9NTI5 1447 aa5.23□□□□□ -1.57
NUP88-213ENST00000576862 LAMC3Q9Y6N6 1575 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 PRXQ9BXM0 1461 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 CEP164Q9UPV0 1460 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 RAPGEF2Q9Y4G8 1499 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 PRAC2D3DTV9 90 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 NKX2-2O95096 273 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ZNF182P17025 639 aaPredicted RBP5.22□□□□□ -1.57
NUP88-213ENST00000576862 BDKRB2P30411 391 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 CLCNKAP51800 687 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 F2RL1P55085 397 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 RPS3AP61247 264 aaKnown RBP5.22□□□□□ -1.57
NUP88-213ENST00000576862 SLC20A2Q08357 652 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ZBTB17Q13105 803 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 DPCR1Q3MIW9 517 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 CDONQ4KMG0 1287 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 FAM76BQ5HYJ3 339 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ZNF280DQ6N043 979 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 FAM122CQ6P4D5 195 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 KCTD18Q6PI47 426 aaPredicted RBP5.22□□□□□ -1.57
NUP88-213ENST00000576862 DPPA4Q7L190 304 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ZNF34Q8IZ26 560 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 DUSP19Q8WTR2 217 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 FAM149B1Q96BN6 582 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 RHBDF1Q96CC6 855 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 TMEM19Q96HH6 336 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 GRAMD2BQ96HH9 432 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 MPP4Q96JB8 637 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 WDFY2Q96P53 400 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ACOX2Q99424 681 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 KRTAP2-2Q9BYT5 123 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 RETREG1Q9H6L5 497 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 POLR1BQ9H9Y6 1135 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 FBRSL1Q9HCM7 1045 aaKnown RBP5.22□□□□□ -1.57
NUP88-213ENST00000576862 IRAK4Q9NWZ3 460 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ZNF69Q9UC07 566 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 KCNG2Q9UJ96 466 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 ADAM18Q9Y3Q7 739 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 PIAS3Q9Y6X2 628 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 URB2Q14146 1524 aaKnown RBP5.22□□□□□ -1.57
NUP88-213ENST00000576862 TOPBP1Q92547 1522 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 CEP162Q5TB80 1403 aa5.22□□□□□ -1.57
NUP88-213ENST00000576862 PDS5AQ29RF7 1337 aaKnown RBP5.22□□□□□ -1.57
NUP88-213ENST00000576862 CUX2O14529 1486 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 A0A0G2JPF8 293 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 HNRNPCL3B7ZW38 293 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 AKR1B15C9JRZ8 316 aaPredicted RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 CLGNO14967 610 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 HNRNPCL1O60812 293 aaKnown RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 MBD4O95243 580 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 HNRNPCL4P0DMR1 293 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 KRT10P13645 584 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 S1PR1P21453 382 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 WBP2NLQ6ICG8 309 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 RGMBQ6NW40 437 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 DUS1LQ6P1R4 473 aaKnown RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 KRBA2Q6ZNG9 492 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 TMTC3Q6ZXV5 915 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 ZNF771Q7L3S4 317 aaPredicted RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 GSTA5Q7RTV2 222 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 ODF3L1Q8IXM7 274 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 BEST3Q8N1M1 668 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 OR14L1PQ8NHC6 308 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 MAGEC3Q8TD91 643 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 FIG4Q92562 907 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 SMARCE1Q969G3 411 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 NAP1L5Q96NT1 182 aaPredicted RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 PCYT2Q99447 389 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 SEBOXQ9HB31 216 aaPredicted RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 LRRC4Q9HBW1 653 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 LTB4R2Q9NPC1 389 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 ACSS1Q9NUB1 689 aaPredicted RBP5.21□□□□□ -1.58
NUP88-213ENST00000576862 DLGAP2Q9P1A6 1054 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 KCNE2Q9Y6J6 123 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 CGNL1Q0VF96 1302 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 CNTNAP2Q9UHC6 1331 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 DNMBPQ6XZF7 1577 aa5.21□□□□□ -1.58
NUP88-213ENST00000576862 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 RAD54L2Q9Y4B4 1467 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 IGHV4OR15-8A0A075B7B6 117 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 FAM237BA0A1B0GVD1 139 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 GOLGA6L9A6NEM1 432 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 EPB41L2O43491 1005 aaKnown RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 TIPRLO75663 272 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 MLYCDO95822 493 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 HLA-DOBP13765 273 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 RRM1P23921 792 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 NLRP5P59047 1200 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 CSTF3Q12996 717 aaKnown RBP5.2□□□□□ -1.58
NUP88-213ENST00000576862 SIGIRRQ6IA17 410 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 GFRALQ6UXV0 394 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 UNQ6126/PRO20091Q6UXV3 157 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 TUBA1AQ71U36 451 aa5.2□□□□□ -1.58
NUP88-213ENST00000576862 CPLX4Q7Z7G2 160 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms