RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 VPS13AQ96RL7 3174 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 A0A1W2PQU0 124 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 RGSL1A5PLK6 1076 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 GOLGA8CPA6NN73 597 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 WNT9AO14904 365 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 LZTS3O60299 673 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 MMP20O60882 483 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 RNGTTO60942 597 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TM7SF2O76062 418 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 RECQL5O94762 991 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 FSBPO95073 299 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 EPN2O95208 641 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ACSL3O95573 720 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 GSTA2P09210 222 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 C1SP09871 688 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 C6P13671 934 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TSHRP16473 764 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 BPIP17213 487 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 MAOBP27338 520 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 NMBRP28336 390 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 SSTR1P30872 391 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PHBP35232 272 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 SPAM1P38567 509 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ETV3P41162 512 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PTGER3P43115 390 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 SPINT3P49223 89 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 STC1P52823 247 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PMS2P54278 862 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 DCDC1P59894 354 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 RPS21P63220 83 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PRAMEP78395 509 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TMPRSS15P98073 1019 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PTSQ03393 145 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ACVR1Q04771 509 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 SGCGQ13326 291 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PTPRCAPQ14761 206 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CRYMQ14894 314 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CCDC6Q16204 474 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 KYNUQ16719 465 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 LONRF1Q17RB8 773 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ANKRD20A4Q4UJ75 823 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 KIAA0895LQ68EN5 471 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 LAIR1Q6GTX8 287 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 KIAA0930Q6ICG6 404 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ESRP1Q6NXG1 681 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CES3Q6UWW8 571 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 UNC5AQ6ZN44 842 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CAPN12Q6ZSI9 719 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 C3orf62Q6ZUJ4 267 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 Q6ZVL8 140 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CYP2U1Q7Z449 544 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 HSD11B1LQ7Z5J1 315 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 HORMAD1Q86X24 394 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 RAVER1Q8IY67 606 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CBARPQ8N350 705 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 OR13C4Q8NGS5 318 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 OR13J1Q8NGT2 312 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 GSDMBQ8TAX9 411 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 EID2BQ96D98 161 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 MFSD3Q96ES6 412 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 FCRL3Q96P31 734 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PLEKHG4BQ96PX9 1271 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TXLNGYQ9BZA5 131 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 CDH19Q9H159 772 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ARRDC1-AS1Q9H2J1 176 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 VPS37BQ9H9H4 285 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 PPANQ9NQ55 473 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TREX1Q9NSU2 369 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 KCTD5Q9NXV2 234 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 NINJ2Q9NZG7 142 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 SLC2A6Q9UGQ3 507 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 APPL1Q9UKG1 709 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 FNDC3AQ9Y2H6 1198 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 COQ6Q9Y2Z9 468 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 KCTD3Q9Y597 815 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 FAM169AQ9Y6X4 670 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 ATXN2Q99700 1313 aaKnown RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 MUC6Q6W4X9 2439 aa6.68□□□□□ -1.34
PRPF8-210ENST00000574217 TP53BP1Q12888 1972 aaPredicted RBP6.68□□□□□ -1.34
PRPF8-210ENST00000574217 GLYATL1P3A0A0U1RQE8 302 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 ZCWPW2A0A1B0GU75 182 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 TCRBV9S1A1TA0A576 114 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 IGLON5A6NGN9 336 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 MEI4A8MW99 385 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 C10orf142B7Z368 130 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 H7C0S8 307 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 CCL22O00626 93 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 RIPK2O43353 540 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 VAPBO95292 243 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 PRAMEF1O95521 474 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 IGHV4-34P06331 123 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 ITPKAP23677 461 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 PSMA3P25788 255 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 MC4RP32245 332 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 STX2P32856 288 aa6.67□□□□□ -1.34
PRPF8-210ENST00000574217 PLA2G5P39877 138 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms