RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 VOPP1Q96AW1 172 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 VAT1Q99536 393 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 HDAC8Q9BY41 377 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 UCKL1Q9NWZ5 548 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 AMACRQ9UHK6 382 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 GGT7Q9UJ14 662 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 MYLKQ15746 1914 aa13.34□□□□□ -0.27
CCDC40-205ENST00000571028 TRAFD1O14545 582 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 SLC7A4O43246 635 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 PLRG1O43660 514 aaKnown RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 RNGTTO60942 597 aaKnown RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 MMP2P08253 660 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 PDHA1P08559 390 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 THEGLP0DJG4 465 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 ETS1P14921 441 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 CES1P23141 567 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 TERF1P54274 439 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 TAS2R38P59533 333 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 PTPRRQ15256 657 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 CCNG2Q16589 344 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 ISXQ2M1V0 245 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 FAXCQ5TGI0 409 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 ITPRIPL1Q6GPH6 555 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 BRAT1Q6PJG6 821 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 IGF2-ASQ6U949 168 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 ARHGEF18Q6ZSZ5 1173 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 PRELID2Q8N945 189 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 IFI44Q8TCB0 444 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 MAGOHBQ96A72 148 aaKnown RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 GRAMD1AQ96CP6 724 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 IMP4Q96G21 291 aaKnown RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 APOLD1Q96LR9 279 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 SPATA13Q96N96 652 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 SLC46A1Q96NT5 459 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 SMIM14Q96QK8 99 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 CCNL2Q96S94 520 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 NAP1L3Q99457 506 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 MYOCQ99972 504 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 WRAP53Q9BUR4 548 aaKnown RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 FRMD8P1Q9BZ68 369 aaPredicted RBP13.33□□□□□ -0.28
CCDC40-205ENST00000571028 SLC25A51Q9H1U9 297 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 PCDH12Q9NPG4 1184 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 NLGN3Q9NZ94 848 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 TRHDEQ9UKU6 1024 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 FADS3Q9Y5Q0 445 aa13.33□□□□□ -0.28
CCDC40-205ENST00000571028 TP53BP1Q12888 1972 aaPredicted RBP13.32□□□□□ -0.28
CCDC40-205ENST00000571028 CFAP69A5D8W1 941 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 TERTO14746 1132 aaKnown RBP13.32□□□□□ -0.28
CCDC40-205ENST00000571028 MMP20O60882 483 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 PGLSO95336 258 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 ZSCAN5DPP0CG00 497 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 CA4P22748 312 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 PSMB4P28070 264 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 PAFAH1B1P43034 410 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 PRPSAP1Q14558 356 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 UGP2Q16851 508 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 RALGPS1Q5JS13 557 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 SEL1L3Q68CR1 1132 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 DENND2CQ68D51 928 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 ERAP2Q6P179 960 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 XKR5Q6UX68 686 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 USP53Q70EK8 1073 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 CCDC89Q8N998 374 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 IPMKQ8NFU5 416 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 ACTRT1Q8TDG2 376 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 ATXN7L3BQ96GX2 97 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 TDRD1Q9BXT4 1180 aaKnown RBP13.32□□□□□ -0.28
CCDC40-205ENST00000571028 PCDH9Q9HC56 1237 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 DKK3Q9UBP4 350 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 CA5BQ9Y2D0 317 aa13.32□□□□□ -0.28
CCDC40-205ENST00000571028 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 GOLGA6L10A0A0M3HER8 536 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 A0A0U1RQS6 177 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 A0A1W2PQU0 124 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 C5orf60A6NFR6 353 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 C10orf142B7Z368 130 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 CES2O00748 559 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 SLC31A1O15431 190 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 HTRA2O43464 458 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 SOCS5O75159 536 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 PIAS2O75928 621 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 ALPIP09923 528 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 SFTPCP11686 197 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 MYF5P13349 255 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 PRLRP16471 622 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 INHBCP55103 352 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 WNT3AP56704 352 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 GALNT3Q14435 633 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 TRIP13Q15645 432 aaPredicted RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 OASLQ15646 514 aaKnown RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 ALG1LQ6GMV1 187 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 RBM44Q6ZP01 1051 aaKnown RBP13.31□□□□□ -0.28
CCDC40-205ENST00000571028 NYAP1Q6ZVC0 841 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 SLC25A41Q8N5S1 370 aa13.31□□□□□ -0.28
CCDC40-205ENST00000571028 EXD3Q8N9H8 876 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms