RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TRAF1Q13077 416 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 KRT32Q14532 448 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 CCDC96Q2M329 555 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 ZNF484Q5JVG2 852 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 GPATCH4Q5T3I0 446 aaKnown RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 DCAF12L2Q5VW00 463 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 SNRNP48Q6IEG0 339 aaKnown RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 CRELD2Q6UXH1 353 aaPredicted RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 SYNE3Q6ZMZ3 975 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 GPR142Q7Z601 462 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 TBC1D10CQ8IV04 446 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 BRSK2Q8IWQ3 736 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 RUBCNQ92622 972 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 MIB2Q96AX9 1013 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 TEFMQ96QE5 360 aaKnown RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 TMEM47Q9BQJ4 181 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 TMEM204Q9BSN7 226 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 IFT27Q9BW83 186 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 MOV10L1Q9BXT6 1211 aaKnown RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 PORCNQ9H237 461 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 HIPK2Q9H2X6 1198 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 SLC38A10Q9HBR0 1119 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 HIF1ANQ9NWT6 349 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 GJD2Q9UKL4 321 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 ICKQ9UPZ9 632 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 RAI2Q9Y5P3 530 aa4.26□□□□□ -1.73
NUP88-202ENST00000570937 DDX60LQ5H9U9 1706 aaKnown RBP4.26□□□□□ -1.73
NUP88-202ENST00000570937 SIPA1L1O43166 1804 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 ATAD5Q96QE3 1844 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 NEDD4P46934 1319 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 BAZ2AQ9UIF9 1905 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 C17orf102A2RUQ5 167 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CLEC18AA5D8T8 446 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 SAC3D1A6NKF1 404 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 BECN2A8MW95 431 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 B4DLN1 442 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 E7EWF7 191 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 IFIT3O14879 490 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 SYN3O14994 580 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 EPB41L2O43491 1005 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 SPRY3O43610 288 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 DHX16O60231 1041 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 CNMDO75829 334 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CALM1P0DP23 149 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CALM2P0DP24 149 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CALM3P0DP25 149 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CCL5P13501 91 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 TNNT1P13805 278 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 KIF5BP33176 963 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 GJC1P36383 396 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CLCNKBP51801 687 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 MRPL12P52815 198 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 ACTR2P61160 394 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 GRB14Q14449 540 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 WTAPQ15007 396 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 ASPRV1Q53RT3 343 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 UBAP2Q5T6F2 1119 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 TMEM268Q5VZI3 342 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 TMEM71Q6P5X7 295 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 MOGAT3Q86VF5 341 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 WDR5BQ86VZ2 330 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CPXCR1Q8N123 301 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 FBXL14Q8N1E6 418 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 NKAPQ8N5F7 415 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 IQCF1Q8N6M8 205 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 LRRC57Q8N9N7 239 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 SCAIQ8N9R8 606 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CLEC18CQ8NCF0 446 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 TMEM163Q8TC26 289 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 OIT3Q8WWZ8 545 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 NTPCRQ9BSD7 190 aaKnown RBP4.25□□□□□ -1.73
NUP88-202ENST00000570937 MAF1Q9H063 256 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 MYLK2Q9H1R3 596 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 ACAD9Q9H845 621 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 RASSF1Q9NS23 344 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 NCKIPSDQ9NZQ3 722 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 SEL1LQ9UBV2 794 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 NRBP1Q9UHY1 535 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 ZNF580Q9UK33 172 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 CNPY2Q9Y2B0 182 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 DERAQ9Y315 318 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 RAP2CQ9Y3L5 183 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 PHIPQ8WWQ0 1821 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 LOC285556D6RIA3 1793 aa4.25□□□□□ -1.73
NUP88-202ENST00000570937 PFASO15067 1338 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 CENPFP49454 3210 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 CCDC69A6NI79 296 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 B9A039 149 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 STMND1H3BQB6 276 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 RGS14O43566 566 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 TCEA3O75764 348 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 CYP1A2P05177 515 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 ICAM1P05362 532 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 T-ENOLP0DO92 83 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 PDHBP11177 359 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 GNLYP22749 145 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 PSMA5P28066 241 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 AVPR1AP37288 418 aa4.24□□□□□ -1.73
NUP88-202ENST00000570937 MLH1P40692 756 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms