RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 KCTD5Q9NXV2 234 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 NINJ2Q9NZG7 142 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZFATQ9P243 1243 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 APPL1Q9UKG1 709 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 CYP8B1Q9UNU6 501 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPO11Q9Y5K1 396 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 SLC30A1Q9Y6M5 507 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM169AQ9Y6X4 670 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 DOCK4Q8N1I0 1966 aa6.58□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3DA0A087WVF3 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3IA0A087WXS9 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3EA0A087X179 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3KA0A087X1G2 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 GLYATL1P3A0A0U1RQE8 302 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 EXOC1LA0A1B0GW35 172 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3FA6NER0 549 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 GOLGA6L10A6NI86 522 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3LB9A6J9 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 DYNC1I1O14576 645 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 WNT9AO14904 365 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 AREL1O15033 823 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 AXIN1O15169 862 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 RIPK2O43353 540 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 LDB2O43679 373 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 BUD23O43709 281 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 VAPBO95292 243 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 PAPSS2O95340 614 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CLDN7O95471 211 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SEMA4FO95754 770 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 ABHD2P08910 425 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3HP0C7X1 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 C6P13671 934 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 LHCGRP22888 699 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CD6P30203 668 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 MC4RP32245 332 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 DRD3P35462 400 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 PPARGP37231 505 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 LIG3P49916 1009 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TPMTP51580 245 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CLCN5P51795 746 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 STC1P52823 247 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 RAB15P59190 212 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 RPS21P63220 83 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TMPRSS15P98073 1019 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SEMG2Q02383 582 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SGCGQ13326 291 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 ITGA9Q13797 1035 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 KYNUQ16719 465 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 ANKRD20A4Q4UJ75 823 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 USP39Q53GS9 565 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SETMARQ53H47 684 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 FASTKD1Q53R41 847 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZRANB3Q5FWF4 1079 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPDYCQ5MJ68 293 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3GQ6DHY5 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZNF470Q6ECI4 717 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3CQ6IPX1 549 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 MRNIPQ6NTE8 343 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 FBXO38Q6PIJ6 1188 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CRTC1Q6UUV9 634 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 FAM151BQ6UXP7 276 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 UNC5AQ6ZN44 842 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 KCNMB4Q86W47 210 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CTAGE3PQ8IX95 158 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 LMNTD2Q8IXW0 634 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TBC1D3Q8IZP1 549 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TTC30BQ8N4P2 665 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 MEIOBQ8N635 442 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 GOLGA6L1Q8N7Z2 621 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR4K2Q8NGD2 314 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR13C4Q8NGS5 318 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 OR2T34Q8NGX1 318 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 HNRNPLLQ8WVV9 542 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SNX19Q92543 992 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 MFSD3Q96ES6 412 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CERS2Q96G23 380 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SIGLEC10Q96LC7 697 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 PLEKHG4BQ96PX9 1271 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CYTH2Q99418 400 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SPATA16Q9BXB7 569 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 ZFAND3Q9H8U3 227 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 BPIFA1Q9NP55 256 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CHRAC1Q9NRG0 131 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CATSPERZQ9NTU4 200 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 NLE1Q9NVX2 485 aaPredicted RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 NSMCE4AQ9NXX6 385 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 USP36Q9P275 1121 aaKnown RBP6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 SERGEFQ9UGK8 458 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 GGT7Q9UJ14 662 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 CRLS1Q9UJA2 301 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 RIMKLBQ9ULI2 386 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 PPIL1Q9Y3C6 166 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 HRH3Q9Y5N1 445 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 FADS3Q9Y5Q0 445 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 TEX264Q9Y6I9 313 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 MYO9BQ13459 2157 aa6.57□□□□□ -1.36
CTDNEP1-204ENST00000570484 A0A1W2PQU0 124 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 TCRBV9S1A1TA0A576 114 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 RGSL1A5PLK6 1076 aa6.56□□□□□ -1.36
CTDNEP1-204ENST00000570484 MROH6A6NGR9 719 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms