RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 VCLP18206 1134 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PRDX6P30041 224 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PSME3P61289 254 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PFKPQ01813 784 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 TAF12Q16514 161 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 NRF1Q16656 503 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 OR52E8Q6IFG1 317 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 FUT10Q6P4F1 479 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PQLC1Q8N2U9 271 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ARHGAP18Q8N392 663 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 AFAP1L2Q8N4X5 818 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 LPCAT1Q8NF37 534 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SCLYQ96I15 445 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 FUBP3Q96I24 572 aaKnown RBP eCLIP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CNBD2Q96M20 576 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 VPS45Q9NRW7 570 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PCDHGB4Q9UN71 923 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 TIMM22Q9Y584 194 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PCDHGB5Q9Y5G0 923 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 H3BMM5 538 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SLC7A4O43246 635 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CRCPO75575 148 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 B3GALNT1O75752 331 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PGM3O95394 542 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 LINC00032P0C843 101 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ETS2P15036 469 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 OR1D2P34982 312 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CASP2P42575 452 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SGSHP51688 502 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 BPIFB3P59826 476 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 FOLH1Q04609 750 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ACAP2Q15057 778 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PIGGQ5H8A4 983 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 FOXB2Q5VYV0 432 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 KIAA0408Q6ZU52 694 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CCDC80Q76M96 950 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 LRRC49Q8IUZ0 686 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 OR4L1Q8NH43 312 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PIP4K2CQ8TBX8 421 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CD99L2Q8TCZ2 262 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF483Q8TF39 744 aaPredicted RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 KLHL32Q96NJ5 620 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PKP2Q99959 881 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CINPQ9BW66 212 aaPredicted RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CCDC68Q9H2F9 335 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 MRM3Q9HC36 420 aaKnown RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CATSPERZQ9NTU4 200 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 APPL1Q9UKG1 709 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SPO11Q9Y5K1 396 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SLC30A1Q9Y6M5 507 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 A0A1B0GTL3 188 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 NR5A2O00482 541 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
LINC00558-201ENST00000569422 NELFEP18615 380 aaKnown RBP8.74□□□□□ -1.01
LINC00558-201ENST00000569422 HTR7P34969 479 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 CCL23P55773 120 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 SH3BP2P78314 561 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 SP3Q02447 781 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 IL10RBQ08334 325 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 GK3PQ14409 553 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 OR4D1Q15615 310 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 MRNIPQ6NTE8 343 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 FBXL19Q6PCT2 694 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 IYDQ6PHW0 289 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 PAQR3Q6TCH7 311 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 GLT6D1Q7Z4J2 308 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 DEFB128Q7Z7B8 93 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 C11orf74Q86VG3 221 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 PGAM4Q8N0Y7 254 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 OR6K2Q8NGY2 324 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 PPWD1Q96BP3 646 aaKnown RBP8.74□□□□□ -1.01
LINC00558-201ENST00000569422 DCUN1D1Q96GG9 259 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 NSMCE3Q96MG7 304 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 PPP1R2P1Q96PQ5 205 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 CCDC28BQ9BUN5 200 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 MFSD1Q9H3U5 465 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 GSTO2Q9H4Y5 243 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 ARNT2Q9HBZ2 717 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF304Q9HCX3 659 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 ATP13A1Q9HD20 1204 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 GALPQ9UBC7 116 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 SCN10AQ9Y5Y9 1956 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 MROH6A6NGR9 719 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 IQCF5A8MTL0 148 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 WASH4PA8MWX3 477 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 A8MX80 341 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.74□□□□□ -1.01
LINC00558-201ENST00000569422 ENPP3O14638 875 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 PEX1O43933 1283 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 OR1I1O60431 355 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 NDUFS3O75489 264 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 UQCRBP14927 111 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 CES1P23141 567 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 ATN1P54259 1190 aaPredicted RBP8.74□□□□□ -1.01
LINC00558-201ENST00000569422 TWF1Q12792 350 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 RPS6KA2Q15349 733 aa8.74□□□□□ -1.01
LINC00558-201ENST00000569422 UNC50Q53HI1 259 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms