RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PDK2Q15119 407 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 NOMO1Q15155 1222 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 PDK4Q16654 411 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 KYNUQ16719 465 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 CCDC142Q17RM4 750 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 BOLA3Q53S33 107 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 TCEAL5Q5H9L2 206 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 RNASEH2BQ5TBB1 312 aaKnown RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 SPOPLQ6IQ16 392 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 VSTM1Q6UX27 236 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 MFSD7Q6UXD7 560 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 ARCQ7LC44 396 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 MRGPREQ86SM8 312 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 TRABD2AQ86V40 505 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 UBALD2Q8IYN6 164 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 LRRC34Q8IZ02 419 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 CBARPQ8N350 705 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 SLC4A11Q8NBS3 891 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 C1orf162Q8NEQ5 155 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 CMASQ8NFW8 434 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 OR5B17Q8NGF7 314 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 LRRC8CQ8TDW0 803 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 ATG4AQ8WYN0 398 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 MAML1Q92585 1016 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 KAT2BQ92831 832 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 LRRC39Q96DD0 335 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 PCYT2Q99447 389 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 ELAC2Q9BQ52 826 aaKnown RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 FERMT1Q9BQL6 677 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 MTG1Q9BT17 334 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 DDX23Q9BUQ8 820 aaKnown RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 HEMGNQ9BXL5 484 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 MAK16Q9BXY0 300 aaKnown RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 PITPNM3Q9BZ71 974 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 MTMR12Q9C0I1 747 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 PLEKHA5Q9HAU0 1116 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 SAYSD1Q9NPB0 183 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 KCNK9Q9NPC2 374 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 DLL3Q9NYJ7 618 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 CHORDC1Q9UHD1 332 aaPredicted RBP5.4□□□□□ -1.54
CAPN3-217ENST00000567817 ITGA11Q9UKX5 1188 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 DNPEPQ9ULA0 475 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 DERAQ9Y315 318 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 CHST2Q9Y4C5 530 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 USH1CQ9Y6N9 552 aa5.4□□□□□ -1.54
CAPN3-217ENST00000567817 CLUHO75153 1309 aa5.4□□□□□ -1.55
CAPN3-217ENST00000567817 PTPRJQ12913 1337 aa5.4□□□□□ -1.55
CAPN3-217ENST00000567817 GAGE12BA1L429 117 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 GAGE12HA6NDE8 117 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TCP11X1B4DZS4 312 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ALG1L2C9J202 215 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ANKRD65E5RJM6 399 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 E7ENQ6 273 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 C5orf67F2Z3F1 127 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 LEFTY2O00292 366 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CHADO15335 359 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 IL1BP01584 269 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 SPATA31D3P0C874 917 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TROVE2P10155 538 aaKnown RBP eCLIP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CYP2C9P11712 490 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 HARSP12081 509 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CD19P15391 556 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PECAM1P16284 738 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ZFXP17010 805 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CD58P19256 250 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TGM2P21980 687 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 NR4A1P22736 598 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CCND1P24385 295 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CDKN1CP49918 316 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MYL6P60660 151 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PSMC1P62191 440 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 RPL7AP62424 266 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 RBP5P82980 135 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PURAQ00577 322 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 BEX3Q00994 111 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 NHLH2Q02577 135 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MBTD1Q05BQ5 628 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 INCA1Q0VD86 236 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 MYO1EQ12965 1108 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ST3GAL2Q16842 350 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 DCAF4L1Q3SXM0 396 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 GALNTL6Q49A17 601 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PREPLQ4J6C6 727 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 CCDC38Q502W7 563 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ATXN7L2Q5T6C5 722 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 LMBRD2Q68DH5 695 aaPredicted RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 SPATA31D4Q6ZUB0 917 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 BZW1Q7L1Q6 419 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ZNF410Q86VK4 478 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 SESTD1Q86VW0 696 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 PLXDC1Q8IUK5 500 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 SYT12Q8IV01 421 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 SRRM1Q8IYB3 904 aaKnown RBP5.39□□□□□ -1.55
CAPN3-217ENST00000567817 ZBED8Q8IZ13 594 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 NAT8LQ8N9F0 302 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 RNF169Q8NCN4 708 aa5.39□□□□□ -1.55
CAPN3-217ENST00000567817 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms