RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TCF3P15923 654 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 AGXTP21549 392 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 MEP1AQ16819 746 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 RABL3Q5HYI8 236 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 FRA10AC1Q70Z53 315 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 TAS2R42Q7RTR8 314 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 SPRED1Q7Z699 444 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 CTU1Q7Z7A3 348 aaKnown RBP16.28■□□□□ 0.2
LINC00554-201ENST00000564841 MFSD6LQ8IWD5 586 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 DENND6AQ8IWF6 608 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 SFRP1Q8N474 314 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 SLC22A17Q8WUG5 538 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 STYXQ8WUJ0 223 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PHF21BQ96EK2 531 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 C3orf30Q96M34 536 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 CCDC90BQ9GZT6 254 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 SARDHQ9UL12 918 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 VWA7Q9Y334 891 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 PMF1-BGLAPU3KQ54 211 aa16.28■□□□□ 0.2
LINC00554-201ENST00000564841 TNPO2O14787 897 aaKnown RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 ARPC2O15144 300 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TSPAN1O60635 241 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 COPZ1P61923 177 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TRIM32Q13049 653 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 LRIT3Q3SXY7 679 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 OR6B3Q8NGW1 331 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 DNAJB14Q8TBM8 379 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF670Q9BS34 389 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 FTHL17Q9BXU8 183 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 PRDM8Q9NQV8 689 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TBC1D14Q9P2M4 693 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 CACNG4Q9UBN1 327 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 AASSQ9UDR5 926 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 VANGL2Q9ULK5 521 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 NME7Q9Y5B8 376 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TARM1B6A8C7 271 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TREHO43280 583 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 NADKO95544 446 aaPredicted RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 MLNP12872 115 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 SPNP16150 400 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 ARL1P40616 181 aaPredicted RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 LEPRP48357 1165 aaKnown RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 IST1P53990 364 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 VBP1P61758 197 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 RACK1P63244 317 aaKnown RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TMEM132DQ14C87 1099 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 BROXQ5VW32 411 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF486Q96H40 463 aaPredicted RBP16.27■□□□□ 0.2
LINC00554-201ENST00000564841 BOLA1Q9Y3E2 137 aa16.27■□□□□ 0.2
LINC00554-201ENST00000564841 TRIP12Q14669 1992 aaPredicted RBP16.27■□□□□ 0.19
LINC00554-201ENST00000564841 SMIM10L2AP0DMW4 78 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 SMIM10L2BP0DMW5 78 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 ADARB1P78563 741 aaKnown RBP16.27■□□□□ 0.19
LINC00554-201ENST00000564841 E2F2Q14209 437 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 SPANXN3Q5MJ09 141 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 MFSD4AQ8N468 514 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 PACRGLQ8N7B6 248 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 HDAC11Q96DB2 347 aa16.27■□□□□ 0.19
LINC00554-201ENST00000564841 PNMA8BQ9ULN7 279 aaPredicted RBP16.27■□□□□ 0.19
LINC00554-201ENST00000564841 ALDOCP09972 364 aaKnown RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 ARCN1P48444 511 aaKnown RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 CTF1Q16619 201 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 USP51Q70EK9 711 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 SLC22A15Q8IZD6 547 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 LILRB4Q8NHJ6 448 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 MYRFLQ96LU7 910 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 TUBA1CQ9BQE3 449 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 PRDM12Q9H4Q4 367 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 MRPL40Q9NQ50 206 aaKnown RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 PIN4Q9Y237 131 aaKnown RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 B4GALT4O60513 344 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 SQLEQ14534 574 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 INPP5AQ14642 412 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 KIF19Q2TAC6 998 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 TMTC4Q5T4D3 741 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 CYHR1Q6ZMK1 362 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 HS3ST5Q8IZT8 346 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
LINC00554-201ENST00000564841 TSNARE1Q96NA8 513 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 BCO2Q9BYV7 579 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 CD320Q9NPF0 282 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 ADAM28Q9UKQ2 775 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
LINC00554-201ENST00000564841 AHSGP02765 367 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 ALBP02768 609 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 CTSHP09668 335 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 CAPN3P20807 821 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 HNRNPFP52597 415 aaKnown RBP16.25■□□□□ 0.19
LINC00554-201ENST00000564841 AP3M2P53677 418 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 BCAT1P54687 386 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 IFRD2Q12894 506 aaPredicted RBP16.25■□□□□ 0.19
LINC00554-201ENST00000564841 UGT3A2Q3SY77 523 aa16.25■□□□□ 0.19
LINC00554-201ENST00000564841 C8orf82Q6P1X6 216 aaPredicted RBP16.25■□□□□ 0.19
LINC00554-201ENST00000564841 KIAA0408Q6ZU52 694 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms