RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 AGBL3Q8NEM8 1001 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 VPS37AQ8NEZ2 397 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 OR13A1Q8NGR1 328 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 ERGIC1Q969X5 290 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 KXD1Q9BQD3 176 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.25□□□□□ -1.73
CHD9-212ENST00000564641 NOX4Q9NPH5 578 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 LUZP4Q9P127 313 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 CARD8Q9Y2G2 431 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 NUP155O75694 1391 aa4.25□□□□□ -1.73
CHD9-212ENST00000564641 SETD1AO15047 1707 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 GOLGA6L9A6NEM1 432 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 LILRA5A6NI73 299 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 PEX12O00623 359 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 SOCS6O14544 535 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 PER2O15055 1255 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 IRAK2O43187 625 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 PLRG1O43660 514 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 SLC22A3O75751 556 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 CNPP09543 421 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 DDX5P17844 614 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 ITGAXP20702 1163 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 CHKAP35790 457 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 USP8P40818 1118 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 FUT6P51993 359 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 SLC20A2Q08357 652 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 IRAK1BP1Q5VVH5 260 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 PLA2G4FQ68DD2 849 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 SATL1Q86VE3 508 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 FTSJ3Q8IY81 847 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 CPXCR1Q8N123 301 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 CLSTN3Q9BQT9 956 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 ISCA1Q9BUE6 129 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 TRMT61BQ9BVS5 477 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 TAOK3Q9H2K8 898 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 FBRSL1Q9HCM7 1045 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 ABCF3Q9NUQ8 709 aa4.24□□□□□ -1.73
CHD9-212ENST00000564641 CISD1Q9NZ45 108 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD9-212ENST00000564641 LRPPRCP42704 1394 aaKnown RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 CDK12Q9NYV4 1490 aaPredicted RBP4.24□□□□□ -1.73
CHD9-212ENST00000564641 RPGRIP1LQ68CZ1 1315 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 UNC13BO14795 1591 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 XIRP1Q702N8 1843 aaKnown RBP4.23□□□□□ -1.73
CHD9-212ENST00000564641 SHPRHQ149N8 1683 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 ZFYVE9O95405 1425 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 VWA3AA6NCI4 1184 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 ASPDHA6ND91 283 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 GRK6P43250 576 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 CCT5P48643 541 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 PITX1P78337 314 aaPredicted RBP4.23□□□□□ -1.73
CHD9-212ENST00000564641 NAA25Q14CX7 972 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 TRNP1Q6NT89 227 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 SLC26A9Q7LBE3 791 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 NFE4Q86UQ8 179 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 FAM160B2Q86V87 743 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 MYCT1Q8N699 235 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 DMBX1Q8NFW5 382 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 SPATA22Q8NHS9 363 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 FBXL8Q96CD0 374 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 NAP1L4Q99733 375 aaKnown RBP4.23□□□□□ -1.73
CHD9-212ENST00000564641 MXRA8Q9BRK3 442 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 SLC32A1Q9H598 525 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 FKRPQ9H9S5 495 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 BABAM1Q9NWV8 329 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 C1RLQ9NZP8 487 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 FEM1BQ9UK73 627 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 ZNF711Q9Y462 761 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 AHDC1Q5TGY3 1603 aaPredicted RBP4.23□□□□□ -1.73
CHD9-212ENST00000564641 IQGAP3Q86VI3 1631 aa4.23□□□□□ -1.73
CHD9-212ENST00000564641 TMEM131LA2VDJ0 1609 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 ALKQ9UM73 1620 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 PABPN1LA6NDY0 278 aaKnown RBP4.22□□□□□ -1.73
CHD9-212ENST00000564641 B9A039 149 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 PIP5K1CO60331 668 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 CFC1P0CG37 223 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 CD53P19397 219 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 RRM1P23921 792 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 GPD2P43304 727 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 BRWD1-AS2P59051 145 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 ERVK11-1P61568 191 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 SERTAD4-AS1Q5TG53 156 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 WDR73Q6P4I2 378 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 B3GNT6Q6ZMB0 384 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 MOB3CQ70IA8 216 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 C2CD5Q86YS7 1000 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 KLHDC8BQ8IXV7 354 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 KIAA2013Q8IYS2 634 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 DSELQ8IZU8 1212 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 KBTBD3Q8NAB2 608 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 SPATA5Q8NB90 893 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 GRAPLQ8TC17 118 aaPredicted RBP4.22□□□□□ -1.73
CHD9-212ENST00000564641 CDCA5Q96FF9 252 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 ZNF570Q96NI8 536 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 KLHL1Q9NR64 748 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 KIF1BO60333 1816 aa4.22□□□□□ -1.73
CHD9-212ENST00000564641 SPHKAPQ2M3C7 1700 aa4.21□□□□□ -1.73
CHD9-212ENST00000564641 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms